Gene
| Gene Model ID | pfu_aug1.0_547.1_00383 |
|---|---|
| Locus | scaffold547.1 : 87989 ... 90515 : - |
| To GenomeBrowser | scaffold547.1:87989..90515 |
| Genes list of scaffold | scaffold547.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_547.1_00383.t1 | 3 | 1 | Fasciclin | 31 | 150 | 4.19969e-42 | 143.1 | 1.1e-36 | 1.6e-32 | 112.2 |
| pfu_aug1.0_547.1_00383.t1 | 3 | 2 | Fasciclin | 168 | 185 | 4.19969e-42 | 143.1 | 0.043 | 640.0 | 0.3 |
| pfu_aug1.0_547.1_00383.t1 | 3 | 3 | Fasciclin | 186 | 215 | 4.19969e-42 | 143.1 | 4.8e-11 | 7.1e-07 | 29.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_547.1_00383.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_547.1_00383.t1 atgaagcttactgtagtcgcagctttctgtttgatttcaacagcattttgccagacaggcaatattgttgatgtagcaaa gcagttgggcgctacaactctgcttgaattggcaactgatgcaggactcgcaggagttctctcaactggaggtccattca ccgtcttcgctccaaccaatgaggccttcagcgctcttccaccaagagtccttaatatgctaaaaaagaacaaacaatta ttagccgatgtcttaaaataccacgtcctaaacggcaaagtatattcatcccagctttcaaatgaattggttacaccaac acttctagaaggattcaaggacagaattaacatttaccagggaggcaaagttgttacatctgaaggaagtcccgtcgtca aggtagatcagaatgcaaccaatggcgtcatccacgtcatcagcaaagtagaattaccaccacgtggtacagttgtagat gctgccaagagaaacaacaagttgggaacccttgtgaaggccgttgttgcagctggtttagtcgagacgttatcaggtgt caccgtaaacgatgctaaagtaactatggccgacgagtcagtaacaaatggtgtcattcacgtcattgacaaagttctca ttccaccaaaataa |
|
Protein
| Protein ID | pfu_aug1.0_547.1_00383.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_547.1_00383.t1 MKLTVVAAFCLISTAFCQTGNIVDVAKQLGATTLLELATDAGLAGVLSTGGPFTVFAPTNEAFSALPPRVLNMLKKNKQL LADVLKYHVLNGKVYSSQLSNELVTPTLLEGFKDRINIYQGGKVVTSEGSPVVKVDQNATNGVIHVISKVELPPRGTVVD AAKRNNKLGTLVKAVVAAGLVETLSGVTVNDAKVTMADESVTNGVIHVIDKVLIPPK |
|