Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5472.1_02008
Locus scaffold5472.1 : 27660 ... 41065 : -
To GenomeBrowser scaffold5472.1:27660..41065
Genes list of scaffold scaffold5472.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_5472.1_02008.t1 gi|348527948|ref|XP_003451481.1| PREDICTED: transducin beta-like protein 2-like [Oreochromis niloticus] 7.0e-15

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
>Adult tissues
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_5472.1_02008.t1
Definition-
>pfu_aug1.0_5472.1_02008.t1
atggatatcaatataggtaaagttgcaatttaccgaaattcaaaggaaatccagacatactggatacaaagagaaataac
agatctcagctttgacattaccagtaaatacctagtgtgtacaggtgacaaacacgcatgtgtgttcaataacattaccg
ggtacaaggccacgatagcagaccttgaggagaaggtcaaggacgcaaacacctccgctcagaaagagagggtcaaacag
cagataaaagatgctcagtcggctttggatgccatccttggaacgtccaatggtcacgctgagagtaaatag

Protein
Protein IDpfu_aug1.0_5472.1_02008.t1
Definition-
>pfu_aug1.0_5472.1_02008.t1
MDINIGKVAIYRNSKEIQTYWIQREITDLSFDITSKYLVCTGDKHACVFNNITGYKATIADLEEKVKDANTSAQKERVKQ
QIKDAQSALDAILGTSNGHAESK

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