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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5479.1_23797
Locus scaffold5479.1 : 34870 ... 48585 : -
To GenomeBrowser scaffold5479.1:34870..48585
Genes list of scaffold scaffold5479.1
Synonym pfu_aug2.0_96.1_20212

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_5479.1_23797.t1
Definition-
>pfu_aug1.0_5479.1_23797.t1
atgcaacacccgtcgctacagctccatggaaacctatcaaaatcggtgattgtctcgatgtatactttgatgcacagatc
agtcgagagcaaggtctggatgaagtcagctttgtatgaatataaaaataagcccgaaggcagtggggcacaattagtac
ccatggggatgacgactatctgttggaatacggttcctccaaacaccacaaaatgttgtcataagaactcaagcatccgg
atgatatcggcgatttgcccatcaggacaatggaatgacgccatctttgacgatgtgcgctactgtttggagtggaataa
cgtcataggattgttctggtgggcaatatcgtccttcaaagagacaaaaataaaccgaactgatcctcaacctaaacaat
gtaatttggccaaagagtgtgaaaattacgtccaaaaatgtatcgaaagacatacatactctcgacgacgatttcgcaaa
ctctttatggacgtagtccattaccttgtatttttgtccgctgtatgtacattaagtgacagtgcaaatgacgacctagt
cgttacacatatagatgatctgatgactatgatgaagcagatgaacgcaacattgcacaaacaacacaggagattggtgg
gtcgtatgattaaagtggacaacaaatttaaggaaatacaaacgttggtgtctgtcatggcacccgacgttgaaaccaat
aagttgatgatgaaaccgctttataacaaaattgacaaaattgaggaaaaggtagacgcactcatcaaaagtgcaaggat
atgcaaggatgagaatgtgacaaatattgttcaagaatatgtaacgggaaagaaaataggagatgccattaagaagcagc
atacatcaaagccaaagtacacatcttgcaacagtcacatgggcaaagagtacgttgtgatgtttcctaaagcctcctgg
tatgccaaatcagcacaaatacttatttcgtcgatagagaacaccaatgttacacttcgctcgcaacatccaggtattaa
caggactataaacgttagagctgataaaggaaccatcgtggatcttccgaaaagtattttccaacagggaagctacgttg
agaacaaaggtatccttctgacgtcgactagtgatatttcggtgaattgctttccgatatctaatattggaggggacgag
aagggggatatttttagtgccatacctgtaaagaatcttgggaaatcatacctttatgttggatacgaccgttctgtgat
gtcaatggtagcactctacgatgatactcatgttaatattacaattacgggatggaattcccctcttcctttatctggga
atcgcgtaaagaatgaaaaatatcaacgtggagatattattcaagtgaagttacaacgcttgtctactttccaaattttc
ggagattcgtccttgttgaatattcgagttgatagtgataagaaaattggcgtggtcacaggatcaactgtcgcaggatt
ttttcacgatggtgttagtaaatacaattgtttactgtcctttattccaccaataacaacatttggtacacaattcattg
ttcctcagaatgccttctcaaaacattcaactgtattcatctattcaaaaaggaacctcacaaataagtatgagtttttt
ggtcgcaaatatttctattcaggatcgtttccaggttatagaagacaacagaaattgaaagctgcatttccttatcttgt
atcaacaagtgcccctagtgctgttatacaaatgacatacatatggacatcgttggtatttccatcacaatctcttattc
cttctttgagtcatttctctaacttttataagttcatgacccctacaagaccagtatttcatcagtatgttgtcatcatt
attctggagaaatacacagatggacttcgatttgatggagtggctatcagggattgggctccagatatacatgtactgcc
tgatgaaaaaagaaaactcgacctgaaatag

Protein
Protein IDpfu_aug1.0_5479.1_23797.t1
Definition-
>pfu_aug1.0_5479.1_23797.t1
MQHPSLQLHGNLSKSVIVSMYTLMHRSVESKVWMKSALYEYKNKPEGSGAQLVPMGMTTICWNTVPPNTTKCCHKNSSIR
MISAICPSGQWNDAIFDDVRYCLEWNNVIGLFWWAISSFKETKINRTDPQPKQCNLAKECENYVQKCIERHTYSRRRFRK
LFMDVVHYLVFLSAVCTLSDSANDDLVVTHIDDLMTMMKQMNATLHKQHRRLVGRMIKVDNKFKEIQTLVSVMAPDVETN
KLMMKPLYNKIDKIEEKVDALIKSARICKDENVTNIVQEYVTGKKIGDAIKKQHTSKPKYTSCNSHMGKEYVVMFPKASW
YAKSAQILISSIENTNVTLRSQHPGINRTINVRADKGTIVDLPKSIFQQGSYVENKGILLTSTSDISVNCFPISNIGGDE
KGDIFSAIPVKNLGKSYLYVGYDRSVMSMVALYDDTHVNITITGWNSPLPLSGNRVKNEKYQRGDIIQVKLQRLSTFQIF
GDSSLLNIRVDSDKKIGVVTGSTVAGFFHDGVSKYNCLLSFIPPITTFGTQFIVPQNAFSKHSTVFIYSKRNLTNKYEFF
GRKYFYSGSFPGYRRQQKLKAAFPYLVSTSAPSAVIQMTYIWTSLVFPSQSLIPSLSHFSNFYKFMTPTRPVFHQYVVII
ILEKYTDGLRFDGVAIRDWAPDIHVLPDEKRKLDLK

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