Gene
| Gene Model ID | pfu_aug1.0_5481.1_02016 |
|---|---|
| Locus | scaffold5481.1 : 85951 ... 90705 : - |
| To GenomeBrowser | scaffold5481.1:85951..90705 |
| Genes list of scaffold | scaffold5481.1 |
| Synonym | pfu_aug2.0_1080.1_01372 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5481.1_02016.t1 | 1 | 1 | 2-Hacid_dh | 5 | 249 | 3.0e-17 | 62.3 | 1.1e-20 | 3.4e-17 | 62.1 |
| pfu_aug1.0_5481.1_02016.t1 | 1 | 1 | 2-Hacid_dh_C | 48 | 225 | 0.0 | 193.7 | 0.0 | 0.0 | 193.4 |
| pfu_aug1.0_5481.1_02016.t1 | 1 | 1 | AdoHcyase_NAD | 85 | 174 | 4.4e-06 | 26.6 | 3.3e-09 | 9.8e-06 | 25.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5481.1_02016.t1 | gi|13359159|dbj|BAB33312.1| | D-lactate dehydrogenase [Octopus vulgaris] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5481.1_02016.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5481.1_02016.t1 atgtcagtgggtagcaatctccgtatcgtggctacaatgtcggtgggtaaggaccacatcgacctgattgagtgctcgag gagaggggtttacgtggctaataccccggatatagccgctgacagcgccgctgatttggctgtggcgctagtactcatgg caacacggagggtgatagaaggtgtggatgcagtgaggaagggtcaatgggaaggatggaaacccacatggctgtgcggc acaagtcttatgaacaagactttgggaattctcggatttggtcgtgttggcttcggaatagctcgccgtctgaagccatt cggaatccataaggtcatttataatgatattcaggaagtggagtacgccttggactttgccgaattcgtttccttcgatg agcttcttgcacaatcggacatcctctgcatttgctgttctctgacctctttgacaaggaatatgtttaccaagagtgaa tttaaaaagatgaagaactccgctgtgctcataaatacctcacgtggtcccatcgtaaaccatgtggacttgactgaagc tttaaaggagggtgacatagcttcggcaggtcttgacgtcaccgatcccgagccacttccggttgatcatcctctgacgt cacttcctaactgcgtcatacttccacatatggggaccagtacgatagaagcgcggaaacacatggccatgaatacagca aagaatatcgttgccatggtgtcgacaaaccagagctga |
|
Protein
| Protein ID | pfu_aug1.0_5481.1_02016.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5481.1_02016.t1 MSVGSNLRIVATMSVGKDHIDLIECSRRGVYVANTPDIAADSAADLAVALVLMATRRVIEGVDAVRKGQWEGWKPTWLCG TSLMNKTLGILGFGRVGFGIARRLKPFGIHKVIYNDIQEVEYALDFAEFVSFDELLAQSDILCICCSLTSLTRNMFTKSE FKKMKNSAVLINTSRGPIVNHVDLTEALKEGDIASAGLDVTDPEPLPVDHPLTSLPNCVILPHMGTSTIEARKHMAMNTA KNIVAMVSTNQS |
|