Gene
| Gene Model ID | pfu_aug1.0_5481.1_02017 |
|---|---|
| Locus | scaffold5481.1 : 91276 ... 103765 : + |
| To GenomeBrowser | scaffold5481.1:91276..103765 |
| Genes list of scaffold | scaffold5481.1 |
| Synonym | pfu_aug2.0_1080.1_01373 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5481.1_02017.t1 | 1 | 1 | Peptidase_C14 | 1 | 196 | 7.0e-23 | 81.5 | 5.6e-27 | 8.4e-23 | 81.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5481.1_02017.t1 | gi|260782939|ref|XP_002586537.1| | hypothetical protein BRAFLDRAFT_138180 [Branchiostoma floridae] | 3.0e-27 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5481.1_02017.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5481.1_02017.t1 atgaagcggcatctcagggagtttgctacacatgaggatctagataaggtggactgtctgtttgtggttttactgtctca cgggaaggaaaatggaggagtctgcggcacggatggacacgatatctccggacaggaaatcatggagatattctcggcac agaattgtcctgcgatgataaacaagccaaaaatgttcattataaatgcatgccgaggagagagagatggcagtagcatt cccataggaagtcagggagcgagcggtaacgtacatacagaccatgtggaaagggaggtaaatcctgtaggacgtacggc atctatggcacctacattaccattaccacagagagtggtcaatcatcaggatatgatagctgcctactctactttccctg gtcatgtggcgtacaggaatactgccgatggaagttggtttatacaggacttggttaaagtattcacagaacactggcac gaagagcatatcctagatctacttactcaggttaaccaagcagtgtccaagagagaggacgaggattttgctcagatacc gtttccgtcaagctctctaaccaagaagtggtacctcaatccgcctctgtaa |
|
Protein
| Protein ID | pfu_aug1.0_5481.1_02017.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5481.1_02017.t1 MKRHLREFATHEDLDKVDCLFVVLLSHGKENGGVCGTDGHDISGQEIMEIFSAQNCPAMINKPKMFIINACRGERDGSSI PIGSQGASGNVHTDHVEREVNPVGRTASMAPTLPLPQRVVNHQDMIAAYSTFPGHVAYRNTADGSWFIQDLVKVFTEHWH EEHILDLLTQVNQAVSKREDEDFAQIPFPSSSLTKKWYLNPPL |
|