Gene
| Gene Model ID | pfu_aug1.0_54844.1_56182 |
|---|---|
| Locus | scaffold54844.1 : 1 ... 3715 : - |
| To GenomeBrowser | scaffold54844.1:1..3715 |
| Genes list of scaffold | scaffold54844.1 |
| Synonym | NA |
Manual annotation
| Study field | structural proteins |
|---|---|
| Gene name | twitchin |
| Description | Twitchin partial sequence. BLASTP hit to AB062881 (Mytius galloprovincialis). |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_54844.1_56182.t1 | 2 | 1 | I-set | 89 | 131 | 2.4e-09 | 36.9 | 2.7e-07 | 0.0013 | 18.5 |
| pfu_aug1.0_54844.1_56182.t1 | 2 | 2 | I-set | 138 | 176 | 2.4e-09 | 36.9 | 1.1e-06 | 0.0055 | 16.5 |
Transcript
| Transcript ID | pfu_aug1.0_54844.1_56182.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_54844.1_56182.t1 atgcgtgctaaggatagtggctttggcttcacgcgatatttggtcaagaatcgtggcacatggtaccagtacagaaaagt cagtaaacagtttatacattgttctggtatttcattatcgtctcgtaccgtatctctaatgtctattgctacacgtacgc tcgactccactcattatgattctagtgtgcgtcatgggctttccagatttcagttgcatcttctgcttgaattgtccgat cgtctgcttcacgtctattatacacaaggcaagatggagatacagagaagagagaaccgttgtcttctccgcattatgaa tgctgaccctgatgatgaggcagaatattcatgtgaatgtggaaaagccaagacgtcatgtaaactcagtgtcactgaac cagaatgggctttcatgaagcagcttgaggacgtagagggaatggagagagagaaggccatttttgagtgtgatgtcaac gacccggaggctgaagtacattggtacaaagctgacggcaaggtacgtataaatgttgctgcctaa |
|
Protein
| Protein ID | pfu_aug1.0_54844.1_56182.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_54844.1_56182.t1 MRAKDSGFGFTRYLVKNRGTWYQYRKVSKQFIHCSGISLSSRTVSLMSIATRTLDSTHYDSSVRHGLSRFQLHLLLELSD RLLHVYYTQGKMEIQRRENRCLLRIMNADPDDEAEYSCECGKAKTSCKLSVTEPEWAFMKQLEDVEGMEREKAIFECDVN DPEAEVHWYKADGKVRINVAA |
|