Gene
| Gene Model ID | pfu_aug1.0_5498.1_02021 |
|---|---|
| Locus | scaffold5498.1 : 27 ... 14470 : + |
| To GenomeBrowser | scaffold5498.1:27..14470 |
| Genes list of scaffold | scaffold5498.1 |
| Synonym | pfu_aug2.0_655.1_17697 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5498.1_02021.t1 | 1 | 1 | NDUF_B5 | 42 | 106 | 8.2e-15 | 54.5 | 2.1e-18 | 1.0e-14 | 54.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5498.1_02021.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5498.1_02021.t1 atggttttgataagatgccttcgatacgctcgatccatttgccctaaaacagtctcaaataaatcaccaaaagaactgtt gagacttgggaatgtaactaaaatgatttcgcgaaaaattgtatttgataaggatccagtggagcgttttatggccaagt atatattttccaccccggagaaacagtatgaaagaaatttgcactacgtgtatatgaaaaacgaatatgatagaatgagt aaaatgcagacagcagtccagagacacatgaagagaaaccaagatttcaagggttggtattacataccgacacccactac acctctatctgaagccaccatgggcgtcgagagtcttggggaaccagcaagtgaaatcaatatttga |
|
Protein
| Protein ID | pfu_aug1.0_5498.1_02021.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5498.1_02021.t1 MVLIRCLRYARSICPKTVSNKSPKELLRLGNVTKMISRKIVFDKDPVERFMAKYIFSTPEKQYERNLHYVYMKNEYDRMS KMQTAVQRHMKRNQDFKGWYYIPTPTTPLSEATMGVESLGEPASEINI |
|