Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5499.1_45233
Locus scaffold5499.1 : 9336 ... 47983 : +
To GenomeBrowser scaffold5499.1:9336..47983
Genes list of scaffold scaffold5499.1
Synonym pfu_aug2.0_303.1_10590

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_5499.1_45233.t1
Definition-
>pfu_aug1.0_5499.1_45233.t1
atgtgtgatatttgtggatatcagtataatggccgtcgtaatttgttgagacatagacgaaaggatcaccaaatctttat
aaaaccaccgcaaaatatgccgtctaagaaattagatagtagcacacctaaacagaacatttcaacgagtagcacaagtt
tggaacatcttagcgtaacaacgttatacaaatcgaccaatcagacggaaagaagagtctccatctcccctccaaaagtt
gatgcacagcagaagtatttcaatgcaattaaaagatgtaaaccaagctttgatttaaaccaaaggtttgggcaagcaaa
tcagatctttgcaaaatcaacagcagggacggaaggcaaaggaactcaggactccagtaattctttagttgaagttgtgg
aagtggatcatacaccttcgaaatatttgtctcacaaacctttacctctggcatatcataggagaccgactgaagctttt
gtagccatacatatgatgccggatccagatgctatcagtattaacgatgatatgtgctcagaggctggtgatgcttcagc
tttctttcaaaattcacgttttttagagataccccatcagcttccaactagtatggataaaggtgcaaacagtagaagac
tgacaaacagtgcaactcctgtaagaaagccttatattaagtcaaatactgcttcagtaaatttacgaaaaaccaatgat
ctcaacgaggtattgttgaaaaacagaccggaagaaaaccgagaaacagatgctagtcatggcacgaaaatatcatacat
ggggaaaaaagtgaagaaagtgaagaaagatgatattcgaaaaggaaaaagaaagaaatgtaagcctgttgtaggtacaa
gagatgatgcatctatgtatagcttctcactgaaatattccgaagaagatgatcagttagacaaagatgtttctgtatca
aatgaatcaattagagatgctgggataaatagtgttgtgtcagacaaaagtgaaagttcattcacaaaagactactcatc
ttgtgaaataggagacatttcaacgtactcatctccggaaaaaaaaccttgcaagatgatgccaagacaaggaactgtca
aatcaaaaagaggacttaaaaaaccatttccaacggtccgtaaacttaaagctccaagttctcttaaacgtgtgaaagag
ttgaaaaagagaagagctaaactggaagaagctgctaagtccttaatgaaatcagggagtaagataacacacgtggaaaa
atcacaaaaagctgacattgattctgtacaaggcacggacagtagtgttattatgaatcattcagccacagacaacaaag
gggaagaggcaatcagctcaagtataccgtcatcaactattgtgagtccttctggaactttgcagacaaaagagataaaa
gaagtatcaagggactctagtgtagaaaaaaagctaagaggtagatcaagaaaatcaacagtctcattccaaggtaaagc
tttgcaaaatgattctgtaaatttacaaacacctgatgctggaatattgaaccatggtggtttagatctctctgtcagca
atgtagaaaaatcacaaaaaggttatgttgattctgttcaaggtacagacaacagtgtaaacaaagggaaggaggcaatc
aagtcaagtataatgtcatcaacaattgtgagctcttctgaaacattgcagacaaaagagagaaaagaagtatctaggga
ctctagtgtagaaaaaaggctaagaggtagacctagaaaatcaacagtctccttgcaagattctgtaaattcacaagcac
ccattggtagtaatgaacttggtactcaaaaggaagattctatgaaggaaagtaaagtcactcgcagcaagactggattg
aagaaaggtgtgaaacgccagcaaactaaatccaagaagctgaatgatggttgtgatttgaatactaatgaagaaaggat
ggaagtgaaagagaacttacaggacaatactaattgtgttcaggattcggtaaatctactggaatcaacgtcacagatga
tggatatatcagtgacagataacatcagtgcaagtgagcaaaatgatacagaggctagtcctgcaccaacaggcaaatca
ccagaaatatcatttcgaatgaacttttgtggtattaaatgtaaagtttcagaagatctgatgttggacaaaaaaattac
atcacaagctgttgtgaagttaaaacagatagatctccatttcttaacttctgaagatatggaaagtgaattgcctgtgg
attgtgcaagtgatggattagagaagactacagagatagatgaagtagatggaactgaagtgggtatgagtgttgagaca
ttgaaccgtagtggcttggatataacagtcggcactgtagagaagatagccatttctgatgctctacctgaagagacgga
agcatcaattcccattgaaactgaagatttctgtccacatgtgtcatcaactccatgttcagagagtcccactgataaaa
ctgatgcttcacatagaaagattttgaccagaaaggctctagcaatccaaccagagatacaagatgagactatagtgaca
gaaaacttggaaggtaaccatgtggagcaggaaggtaaccctgaggaacatagcaaggatgtcagtgttgataagaactc
acttagtagcagcaatgagagtgtgatacctggaatgacaaagacacaagtggtgaggactggtaaaattgttgataatg
gactatccaaaatcacatcacaaaatatattttcaagtaggatacttcagaaagtagattcaccgttacaaattcttaga
atgtttattcctgtcatgaaagaagtgaaaggtctcgatctcaagatgatcacaaaaaaagctccacagaaacaacaagt
tgtagaggtgctagattttaggagtgaggcaaataaatctcccgtcatgaaggatgcagccattgacagtgaaggaaact
tgtccacttctattgaagaacataacacgtctgcagaagtgatacatgacacaagtccagaggaggaggaggaggtactg
catgataatgttggagctgaggatatgattgttgatcaggagattacacatgatgtgacgcctgatatttcggaggaagt
taccattactacagacaatggtgaggtactggcacaagaagatggtactgacaatgtgggaaattcaggtgaaaacacag
atactttagtcactcatatttgtgttcagtgtgcctgtgaatttgagtccaaagacaaacttgaccatcatacctgttcg
aacaaaagcccagtgaagaggtcaccacggaaaccaaagccatccagcaagaaaaaagaatttcagtgtaagttctgtga
cttgaagtattacagaaggagtagcttacagtctcacttaatgtcatcacatgcaggagaggaattaattcacacaagtg
agatgtctgcaagcttacaagaatgtacgaatagcatcattgatactattaatgaagttgtcattaagtcttcttccatg
gcttctgaaggtaaagttcaccaagatttggaagaaattcttccagagtcatcttctagccatgaacactctaacaaccc
agctgaatctgaaggctttgatgatacaggtccgagcgatacagcggatgaatctcccaatcattctttgacgaaggcta
aggaggaattcactaaagactttatcctgactaagctacacgacattaagccagctcttcagttttctgcatgccgccaa
atcatgagcgggctggtcagtgtgaaagatgtgcagatggcttcagaaaatcaggatgatgtgcaactcaagagaattag
cgaaaatatttggatagtgaaaaattcaagtggcaaaacaaaacatgaagactttaacaccagcattgtctcggagaatt
catcagtgtcagttcaaggtgtaaataaatgccaaaatgaactggatgaacaagtatgtggagaaaatacatcagtgtca
attccaggttctgtgaacagcccatgtgatatggatgaacaagcatgtgctaaaaaggattcatactttactgtgaaagt
tgctctaaatccgagtttagaaactgatgaagttgaagaggatgatgttacggataactttgcttttaatatagagagaa
gaaaagtcaagaaacctaaactgttagaagattgctatgtgacatcctatcctgccaaaaagattatatccaagaaagaa
aaagaaggaaaaaggaacgagtcaggtatgacagacttcgagaaagcgattgctgttgatgagaaggttaaaatgaagcg
aaaaaaatctaagtcagtaaaaccaacattaattgagagacccaaatcaacagtcagcaatagactttcttcggccaaaa
caagtacctcagacaaaaaaaatgcaggagaccgcaaagagagaaaattctcagaggaggagttaaaacttcatgcaata
gaagccaaagcagcaccacagtcaaaaactgtaatgaaaatattgagagaaaaagctctggaggagaagcagagagagga
agcctttcagccaaccataactgaacttcccaccttctcggaaatattaactgctacaacaaagacggtagctactcggg
aatatactcatggagagaatcagaacttaaagaggggtgccgggaatcaagttatgaaccaggaggattatgtaacagat
gcatttgatgacattgcaactggtactgatatggacgttaattttgatgatgtcaatatgctatgtgaacaagaattatt
caaggatgatgcacaagtcgtaaaagatgcactttctgcagcccagaacttcagtgataccaggcttactgaggaactgt
ctaacacaaatagatctgaagatttcttgacacaagaacagaacacaggttatgatgcttcaaatttccttgatcaaata
tatggtccaaagaaaagctttactcgtagcttcaggaaaactgacagaacattagagaaagagaagattgaatttaagtc
accattattttcaaatgaaaatcagacagggactcaaaaaatcaatagaaacaaagtgccagtttctaaaccaaagccag
actttgataaactacgtcaaatgttagaaaataccatggcacagagcaccatgggccatgggttgttatcagagtcctca
atacaaaacaagacggacagcattccagaacccgatgattcattaacaactgcaagtgtttttggaactgatccatctaa
gtctgattctgttcctaagttttctttcttgagtagaccaacgattcaaatgaaggatgattcgaagattaccgttaagg
ctacaggagagaagcaaaataatgaggattcttgcgatattgtctatgatcaaacaataaatatttcaactgaagatata
ccagattccagtagtgtgaagagggtgccgtactcagttgtcaaaaagagtgtcccggattcaactaccattgatttctc
gtcatctcctttaaaagtgcaggtgtttactgaaggcaatgatcagtccaataagagattagtaacggtaaagggtgccg
tgcaggagaatgactttgaccaggcgtcaggagcagtttcctcgtcaggtttctctgtcggctctattgcctcaggatca
tctacatgctctgaggaaaatggtgaatctgcacctttggagaaggagccatgtacaacagaaaccaacaacccagtaaa
cagtgatgattctactaaagattcctctcacagtcgtaatgaggaggcacaaagtcccaaagtaagcttggaggaggaaa
gctcaaaaggaagcttggaggtgcatagtcataaattgtctcaggaagatgagagtcccaaaatatgtcaggaagaaatg
agtcctgaagagaatatgaacgagcagagtcctgaagagagaatggaggagaagagtcctgaagagagaatggaggagca
gagtcctaaagaaagcctagaggagcgtagtcccagtgtagatgaagatgacaagaagagtgaggatgaggaggagtcct
ctagttctgaagacagcagtgatgacagttcagatgatgatgacagtgacaatgataaggaggatgagcaatctgaagaa
agtgatgatgctgaagatgaagaaagaggttcaccagttaccaaggaaacgagtgagactcatgatgagcatatagtgga
gttacaactgttcgctgattctgatgactcattcctggaggatgaagatgatgagatctcagtcactaagattgtcaaca
cggaacaaaaatatcaaatggaagataagaaagaggaaatgaaaaatggtaataatggtatccaagacaacatgaatgta
gaggacatggaggtggaggacggaacatctgataataaccagatcaatggcagtaacagagcgtttgaagtgttccgatt
cctgtctacccttgacttggtatttccgtcagagacccttacgatgttgctccacttatcgttcagtcattgtgatgtag
actgtgcgtttgagctactggagtatctgtgtcaggggagaataatcaatgaggaagtgtttttagtgaaagtagaaaca
gaccggctgtggaaagttcttattcactgtaaccatatcatggattttaccatccctttaacgatactgaccccagcatt
tcagtgcatgtttaaagataccactaaactacaattagctgcagtgtggctgtcgtcctgtgatcagatcttactcagaa
ggcttgacatagcgatcctcaggagaatgcgtacagtgctaatggaaaacaactatattgaacatcgaaatatgctggat
tcaccaatttctgagaaagcaaattgcctgttgggttgctttgtatcaaagaactacacatacatggccgagatatttat
agacataagtaccacacaggattgctccaatcagtgttacatcaaggctctggtagatggctttaacagctatcattgtt
tgggcaaggaagtcttctatcaaaaagtggaagaattcttgaagagagtgaatatggcatatgacaatgatttcaccgtg
ttctttgagcatgtcgtcaagcgttcgctggccatctcggacttgttttcagcgcggggagcttacaatatctacgagaa
ctgtattggtgagcagggtctacctgttggtctccgtagagggctcctatcagcctgggggacctggtaccagacagagg
gaatacagagcttattcgatgatcttttggagcacaacatataccctactcaggttatagaagattcaccaaggattata
cagatatggacatcattaacgttagctgaagttaaacttattctacaagattatttgaattctttgtacgcttttctgtg
cgagttgctaaaagagaagaggaccaagtatttgtctgagcaggatctctctcttggaataaagatcgttaacaaggatt
ccgatcccaccgttgcccccttaggttgtttgactccacagaatgtgttggcaatgaagagtgcattaattacacttctt
gaagaagagttcaagccggcgttgatcgtggcaaatcgttatgctgcgcagtataacccccaacaagactttttgtgccg
tattttctctccgtcactactggaatacctacaggagatagacaaaaagaaactcaagcgtggcttgttgttttctaaag
agattagtaatcaggtgtcgtcccatactcgtaggaacaatccaactcacaggtattga

Protein
Protein IDpfu_aug1.0_5499.1_45233.t1
Definition-
>pfu_aug1.0_5499.1_45233.t1
MCDICGYQYNGRRNLLRHRRKDHQIFIKPPQNMPSKKLDSSTPKQNISTSSTSLEHLSVTTLYKSTNQTERRVSISPPKV
DAQQKYFNAIKRCKPSFDLNQRFGQANQIFAKSTAGTEGKGTQDSSNSLVEVVEVDHTPSKYLSHKPLPLAYHRRPTEAF
VAIHMMPDPDAISINDDMCSEAGDASAFFQNSRFLEIPHQLPTSMDKGANSRRLTNSATPVRKPYIKSNTASVNLRKTND
LNEVLLKNRPEENRETDASHGTKISYMGKKVKKVKKDDIRKGKRKKCKPVVGTRDDASMYSFSLKYSEEDDQLDKDVSVS
NESIRDAGINSVVSDKSESSFTKDYSSCEIGDISTYSSPEKKPCKMMPRQGTVKSKRGLKKPFPTVRKLKAPSSLKRVKE
LKKRRAKLEEAAKSLMKSGSKITHVEKSQKADIDSVQGTDSSVIMNHSATDNKGEEAISSSIPSSTIVSPSGTLQTKEIK
EVSRDSSVEKKLRGRSRKSTVSFQGKALQNDSVNLQTPDAGILNHGGLDLSVSNVEKSQKGYVDSVQGTDNSVNKGKEAI
KSSIMSSTIVSSSETLQTKERKEVSRDSSVEKRLRGRPRKSTVSLQDSVNSQAPIGSNELGTQKEDSMKESKVTRSKTGL
KKGVKRQQTKSKKLNDGCDLNTNEERMEVKENLQDNTNCVQDSVNLLESTSQMMDISVTDNISASEQNDTEASPAPTGKS
PEISFRMNFCGIKCKVSEDLMLDKKITSQAVVKLKQIDLHFLTSEDMESELPVDCASDGLEKTTEIDEVDGTEVGMSVET
LNRSGLDITVGTVEKIAISDALPEETEASIPIETEDFCPHVSSTPCSESPTDKTDASHRKILTRKALAIQPEIQDETIVT
ENLEGNHVEQEGNPEEHSKDVSVDKNSLSSSNESVIPGMTKTQVVRTGKIVDNGLSKITSQNIFSSRILQKVDSPLQILR
MFIPVMKEVKGLDLKMITKKAPQKQQVVEVLDFRSEANKSPVMKDAAIDSEGNLSTSIEEHNTSAEVIHDTSPEEEEEVL
HDNVGAEDMIVDQEITHDVTPDISEEVTITTDNGEVLAQEDGTDNVGNSGENTDTLVTHICVQCACEFESKDKLDHHTCS
NKSPVKRSPRKPKPSSKKKEFQCKFCDLKYYRRSSLQSHLMSSHAGEELIHTSEMSASLQECTNSIIDTINEVVIKSSSM
ASEGKVHQDLEEILPESSSSHEHSNNPAESEGFDDTGPSDTADESPNHSLTKAKEEFTKDFILTKLHDIKPALQFSACRQ
IMSGLVSVKDVQMASENQDDVQLKRISENIWIVKNSSGKTKHEDFNTSIVSENSSVSVQGVNKCQNELDEQVCGENTSVS
IPGSVNSPCDMDEQACAKKDSYFTVKVALNPSLETDEVEEDDVTDNFAFNIERRKVKKPKLLEDCYVTSYPAKKIISKKE
KEGKRNESGMTDFEKAIAVDEKVKMKRKKSKSVKPTLIERPKSTVSNRLSSAKTSTSDKKNAGDRKERKFSEEELKLHAI
EAKAAPQSKTVMKILREKALEEKQREEAFQPTITELPTFSEILTATTKTVATREYTHGENQNLKRGAGNQVMNQEDYVTD
AFDDIATGTDMDVNFDDVNMLCEQELFKDDAQVVKDALSAAQNFSDTRLTEELSNTNRSEDFLTQEQNTGYDASNFLDQI
YGPKKSFTRSFRKTDRTLEKEKIEFKSPLFSNENQTGTQKINRNKVPVSKPKPDFDKLRQMLENTMAQSTMGHGLLSESS
IQNKTDSIPEPDDSLTTASVFGTDPSKSDSVPKFSFLSRPTIQMKDDSKITVKATGEKQNNEDSCDIVYDQTINISTEDI
PDSSSVKRVPYSVVKKSVPDSTTIDFSSSPLKVQVFTEGNDQSNKRLVTVKGAVQENDFDQASGAVSSSGFSVGSIASGS
STCSEENGESAPLEKEPCTTETNNPVNSDDSTKDSSHSRNEEAQSPKVSLEEESSKGSLEVHSHKLSQEDESPKICQEEM
SPEENMNEQSPEERMEEKSPEERMEEQSPKESLEERSPSVDEDDKKSEDEEESSSSEDSSDDSSDDDDSDNDKEDEQSEE
SDDAEDEERGSPVTKETSETHDEHIVELQLFADSDDSFLEDEDDEISVTKIVNTEQKYQMEDKKEEMKNGNNGIQDNMNV
EDMEVEDGTSDNNQINGSNRAFEVFRFLSTLDLVFPSETLTMLLHLSFSHCDVDCAFELLEYLCQGRIINEEVFLVKVET
DRLWKVLIHCNHIMDFTIPLTILTPAFQCMFKDTTKLQLAAVWLSSCDQILLRRLDIAILRRMRTVLMENNYIEHRNMLD
SPISEKANCLLGCFVSKNYTYMAEIFIDISTTQDCSNQCYIKALVDGFNSYHCLGKEVFYQKVEEFLKRVNMAYDNDFTV
FFEHVVKRSLAISDLFSARGAYNIYENCIGEQGLPVGLRRGLLSAWGTWYQTEGIQSLFDDLLEHNIYPTQVIEDSPRII
QIWTSLTLAEVKLILQDYLNSLYAFLCELLKEKRTKYLSEQDLSLGIKIVNKDSDPTVAPLGCLTPQNVLAMKSALITLL
EEEFKPALIVANRYAAQYNPQQDFLCRIFSPSLLEYLQEIDKKKLKRGLLFSKEISNQVSSHTRRNNPTHRY

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495