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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5504.1_59781
Locus scaffold5504.1 : 18579 ... 33345 : -
To GenomeBrowser scaffold5504.1:18579..33345
Genes list of scaffold scaffold5504.1
Synonym pfu_aug2.0_2134.1_15424

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_5504.1_59781.t1 gi|158299006|ref|XP_319125.4| AGAP009988-PA [Anopheles gambiae str. PEST] 4.0e-18

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
8-16cell 1
egg-Dshape 1
trochophore 1
>Adult tissues
Dshape 1
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_5504.1_59781.t1
Definition-
>pfu_aug1.0_5504.1_59781.t1
atgaaggattttgagacgttttttgaatatctctctttcatcatgttaattggtaaaagttttattacaggcgtgaaaag
tcgagatctgatcgtcataaagtacttctttaatatacgttgccgtaaaatggtgacaccatacgagaaatttctaatga
aggaaactaggaagctttttgaagaaaacagcatgattgcattttgtcatgtattacccataaaactaaatattaggacc
aagtactactatagactgagagagaaaaattacattctacttaattgggcaagtggtaaactgatgagacaagccatggc
tgacacacgctacaagaatattctaccgctctgtcgttctagtgtatctgttatcattagtaaaaatccagatttacccg
tgctactatcacagctgaaaaaaatgccagaatacattctcatggggatgttatgggacgacaaactattgaatgttgag
gaagtgggaagactcgctaaagttccaaatatagaatctcttcggggagaatttgttagcattcttaatttagcgggagg
acaaaaatcatactctctattaagtagtcaccaacaagtgttagccatgaacttagaccagtatgtaaaacaatgtgagc
aggatcaatccaaaaatacaaacttgagtcaatcctcagctcagagcagtgactcagactctagtgatggcgagtcaagt
tcaggcagtgactcagattga

Protein
Protein IDpfu_aug1.0_5504.1_59781.t1
Definition-
>pfu_aug1.0_5504.1_59781.t1
MKDFETFFEYLSFIMLIGKSFITGVKSRDLIVIKYFFNIRCRKMVTPYEKFLMKETRKLFEENSMIAFCHVLPIKLNIRT
KYYYRLREKNYILLNWASGKLMRQAMADTRYKNILPLCRSSVSVIISKNPDLPVLLSQLKKMPEYILMGMLWDDKLLNVE
EVGRLAKVPNIESLRGEFVSILNLAGGQKSYSLLSSHQQVLAMNLDQYVKQCEQDQSKNTNLSQSSAQSSDSDSSDGESS
SGSDSD

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