Gene
| Gene Model ID | pfu_aug1.0_551.1_36583 |
|---|---|
| Locus | scaffold551.1 : 49669 ... 50935 : - |
| To GenomeBrowser | scaffold551.1:49669..50935 |
| Genes list of scaffold | scaffold551.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_551.1_36583.t1 | 2 | 1 | Ras | 4 | 62 | 8.1e-13 | 48.0 | 1.7e-16 | 1.2e-12 | 47.4 |
| pfu_aug1.0_551.1_36583.t1 | 2 | 2 | Ras | 75 | 85 | 8.1e-13 | 48.0 | 0.55 | 4100.0 | -3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_551.1_36583.t1 | gi|291480601|gb|ADE06378.1| | RAB9 [Microtus arvalis] | 5.0e-19 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_551.1_36583.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_551.1_36583.t1 ttcaagatgggaatactttcccctttgtgattattgggaataaaatcgacgtagagaaccgaagtgtttccgacgatgac gcggtcacatggtgtcgcaataacgggcatgcgccatatttcgaaaccagcgcgaaagactcgacaaatgtcgaaaacgc tttcaaagcggcgatcaaaaggttgaaggaacttgaagatgtgatagaagtcaaaccacaaaccggaaatacggtcgacc ttaaaaagaaagcaaaggcccaaaattcgtcatgctgtggcaattaa |
|
Protein
| Protein ID | pfu_aug1.0_551.1_36583.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_551.1_36583.t1 QDGNTFPFVIIGNKIDVENRSVSDDDAVTWCRNNGHAPYFETSAKDSTNVENAFKAAIKRLKELEDVIEVKPQTGNTVDL KKKAKAQNSSCCGN |
|