Gene
| Gene Model ID | pfu_aug1.0_5520.1_59792 |
|---|---|
| Locus | scaffold5520.1 : 18836 ... 23527 : + |
| To GenomeBrowser | scaffold5520.1:18836..23527 |
| Genes list of scaffold | scaffold5520.1 |
| Synonym | pfu_aug2.0_1955.1_18614 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5520.1_59792.t1 | 1 | 1 | Glucosamine_iso | 14 | 153 | 5.7e-16 | 58.8 | 1.3e-19 | 9.4e-16 | 58.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5520.1_59792.t1 | gi|198422119|ref|XP_002130881.1| | PREDICTED: glucosamine-6-phosphate isomerase 1-like [Ciona intestinalis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5520.1_59792.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5520.1_59792.t1 atgaggttaatgattctagatgactatgacaaggtcagtttaccacgagatcatcctgagagctaccatacatttatgtg ggagaattttttcaagcatattgacatagatccccagaatgcccacatcctggacggtaatgctgcagatacgaccaagg aatgcgaagagtatgagagaaaaataagcgaggctggtggaatagaattgtttgttggagggataggaccggatggccac attgccttcaatgagccgggatcgagtttagtatccaggactcgtataaagacgctggcacaagatacgattatagctaa cgcccgattctttggaggggatctgtcaaaggttccgaagcaggcattgactgtgggagtgggcactgtaatggatgcta aagaggtaatgatcctgattacgggagcacataaatcttttgccctccacaaggcgatagaggagggagttaaccacatg tggacagtatcggcattccagcaacatcccaaatctatcttcgtttgtgatgaggacgccacattggagctcaaggtcaa aaccgtccgttacttcaaggacttaatgaaccttcacaatcagatgatagcggagaagtag |
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Protein
| Protein ID | pfu_aug1.0_5520.1_59792.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5520.1_59792.t1 MRLMILDDYDKVSLPRDHPESYHTFMWENFFKHIDIDPQNAHILDGNAADTTKECEEYERKISEAGGIELFVGGIGPDGH IAFNEPGSSLVSRTRIKTLAQDTIIANARFFGGDLSKVPKQALTVGVGTVMDAKEVMILITGAHKSFALHKAIEEGVNHM WTVSAFQQHPKSIFVCDEDATLELKVKTVRYFKDLMNLHNQMIAEK |
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