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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5522.1_67269
Locus scaffold5522.1 : 50016 ... 68319 : -
To GenomeBrowser scaffold5522.1:50016..68319
Genes list of scaffold scaffold5522.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_5522.1_67269.t1 1 1 Ldl_recept_a 2 42 9.1e-08 31.8 1.0e-11 1.5e-07 31.1

Transcript
Transcript IDpfu_aug1.0_5522.1_67269.t1
Definition-
>pfu_aug1.0_5522.1_67269.t1
ctctgtccatctggttggttcacgtgcagttccggaggaataacgtgcattgagcagtctttcaaatgtgattgttcaca
tgactgtgacgacggaagtgacgaagacgtgacgtatgcatcatgcagtcctcaactggcagtggcttgccagagcggag
caggactcgtcaaaccttcgctgagtgccctgctgctgatattgatggcgtgtgtcgtccaatttttctggaaataa

Protein
Protein IDpfu_aug1.0_5522.1_67269.t1
Definition-
>pfu_aug1.0_5522.1_67269.t1
LCPSGWFTCSSGGITCIEQSFKCDCSHDCDDGSDEDVTYASCSPQLAVACQSGAGLVKPSLSALLLILMACVVQFFWK

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