Gene
| Gene Model ID | pfu_aug1.0_55233.1_27370 |
|---|---|
| Locus | scaffold55233.1 : 1 ... 4123 : - |
| To GenomeBrowser | scaffold55233.1:1..4123 |
| Genes list of scaffold | scaffold55233.1 |
| Synonym | pfu_aug2.0_635.1_17667 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_55233.1_27370.t1 | 1 | 1 | Orn_Arg_deC_N | 2 | 179 | 0.0 | 201.6 | 0.0 | 0.0 | 201.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_55233.1_27370.t1 | gi|126697432|gb|ABO26673.1| | ornithine decarboxylase 1 [Haliotis discus discus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_55233.1_27370.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_55233.1_27370.t1 ccatgccgtgctgaagctcctggttgacatgggtctatcctttgattgtgcaagcaagggagagatagagaaggtactag ccctaggggtggatccagaaaggattgtgtatgctaatccctgtaagcagacctccttcatcaagtatgctgccaagaaa catgtctccatgatgacctttgacaatgaagatgaactccataagatcaaagcattctacccagatgctcagcttatctt gagaatcttgccacagtcaaacttcaaagtccagtgtgagcttgggaacaaatttggatgtaaccccaagaaagctcgat atctgttagcggcagccaaagatctgggactcaatgttatgggcattagctttcacgtgggcagcggctgtgaagaagct gaagcatttgctgtggctgtacagcaggccagagacgccttcgatgcggccctccaacttggctttgacatgaccatgct tgacattggaggtggattccctggacagtcttctgctccaatctcatttgaagaggtgtgtttgtgtttttaa |
|
Protein
| Protein ID | pfu_aug1.0_55233.1_27370.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_55233.1_27370.t1 HAVLKLLVDMGLSFDCASKGEIEKVLALGVDPERIVYANPCKQTSFIKYAAKKHVSMMTFDNEDELHKIKAFYPDAQLIL RILPQSNFKVQCELGNKFGCNPKKARYLLAAAKDLGLNVMGISFHVGSGCEEAEAFAVAVQQARDAFDAALQLGFDMTML DIGGGFPGQSSAPISFEEVCLCF |
|