Gene
| Gene Model ID | pfu_aug1.0_554.1_15119 |
|---|---|
| Locus | scaffold554.1 : 29598 ... 45875 : - |
| To GenomeBrowser | scaffold554.1:29598..45875 |
| Genes list of scaffold | scaffold554.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_554.1_15119.t1 | 1 | 1 | zf-C4 | 20 | 87 | 8.0e-22 | 77.2 | 2.2e-25 | 8.0e-22 | 77.2 |
| pfu_aug1.0_554.1_15119.t1 | 2 | 1 | Hormone_recep | 282 | 333 | 1.1e-10 | 40.9 | 0.22 | 810.0 | -1.1 |
| pfu_aug1.0_554.1_15119.t1 | 2 | 2 | Hormone_recep | 352 | 510 | 1.1e-10 | 40.9 | 3.0e-14 | 1.1e-10 | 40.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_554.1_15119.t1 | gi|115727676|ref|XP_781794.2| | 1.0e-17 |
Transcript
| Transcript ID | pfu_aug1.0_554.1_15119.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_554.1_15119.t1 atggactcgacatctaccaaagacagtcagaaatcagggagtcctctagagtacccaccctgtaaggtgtgtggagggac aggggccggtaaacattacggtgtacacacctgtcaaagctgtaagacgttttttagacgctacttgaaaagagagaagc catatgtatgtgtcggtaatgccgattgtaaagtggtcaactcaagtcgtggtaactgttcagcatgccgagccaaaaaa tgccaacaggtcggaatgtcagtcggaggaatcaaaatcggaaggcgtacacttaaggaaagaaacaaaacaattctggc agtgaaagaattgcaaacagaacaagagaaaacaaggaccagatatgaaattctgcgatcggaagctcaaaagcgattaa cagatctacgaagagatcgtcccaatttagtgaatctctatccatgggagataaatgatgatcaagaaaagataaatccg aacgattgtaaggaatgtaaagctattggtacagatgatgagatcgtccattcagagaacgcctacagtaacagaagcaa gtcatctaatgacagtcataacgacaatgacgatgatgatgacctgttagctgaacttttagaggagagtgataacttgg tctcgttatcgacaattacagatatatctgataatgtcaatgacgacatggacttttactctttgtccccaagaagccta caggaatgctttacacagttcatggagtggacagaggaagaaagccatctcctctatcagaagacagagacacagaaact acctgacgatatcattcaagatcttgtcgatggttttaaagaaattaaagtgcactctcatctaacggatgatgaaatta tgaataagattcgagaggaatatgacaagatgcagttaacgacagctgctataggacctatgggagtcatgacaaatgag gaatacataaactttttctcaactaccggattcgacatagaaggcagatcaaaacagttgagaagatttacctcccaagt agctccgttcctaagaagaattttaaaatttgcacataaaattcccggatttaaatcactaataccaaaagacagagctt cgttaataaaagcatcaaagagcgaagttcaagtacttatgttgaacagagccgtggatcctgaccttgagatgtggatg gtttggtgtggagacgtgttggacgtcaatagatcctggatgtttggaagcattgagaataggaaaaagtggttctcatt ggctaaggaaacacgtgatctcaatctctcgactgaggaaatggcagtcgtcatgggcatgtctatgacatttactgatc gctgtagtttgcaccagccagtggaagtggacaaaatcaatttgaaccttacaagttatcttcaaacactattacagaga cgttacaaagatacagccaacaaccagctttgtaaaatcatgaaactattcgtcaacttaaggtcattttcacatgcaag agatgttcaaataagacaatttgtatctaatgaattggtgaaatcgaattttccaaatgtgaaatacgttcgtgcactgt ttagcgaataa |
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Protein
| Protein ID | pfu_aug1.0_554.1_15119.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_554.1_15119.t1 MDSTSTKDSQKSGSPLEYPPCKVCGGTGAGKHYGVHTCQSCKTFFRRYLKREKPYVCVGNADCKVVNSSRGNCSACRAKK CQQVGMSVGGIKIGRRTLKERNKTILAVKELQTEQEKTRTRYEILRSEAQKRLTDLRRDRPNLVNLYPWEINDDQEKINP NDCKECKAIGTDDEIVHSENAYSNRSKSSNDSHNDNDDDDDLLAELLEESDNLVSLSTITDISDNVNDDMDFYSLSPRSL QECFTQFMEWTEEESHLLYQKTETQKLPDDIIQDLVDGFKEIKVHSHLTDDEIMNKIREEYDKMQLTTAAIGPMGVMTNE EYINFFSTTGFDIEGRSKQLRRFTSQVAPFLRRILKFAHKIPGFKSLIPKDRASLIKASKSEVQVLMLNRAVDPDLEMWM VWCGDVLDVNRSWMFGSIENRKKWFSLAKETRDLNLSTEEMAVVMGMSMTFTDRCSLHQPVEVDKINLNLTSYLQTLLQR RYKDTANNQLCKIMKLFVNLRSFSHARDVQIRQFVSNELVKSNFPNVKYVRALFSE |
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