Gene
| Gene Model ID | pfu_aug1.0_55510.1_41635 |
|---|---|
| Locus | scaffold55510.1 : 1 ... 4020 : + |
| To GenomeBrowser | scaffold55510.1:1..4020 |
| Genes list of scaffold | scaffold55510.1 |
| Synonym | pfu_aug2.0_1022.1_08100 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_55510.1_41635.t1 | 1 | 1 | PUL | 1 | 230 | 0.0 | 162.9 | 0.0 | 0.0 | 162.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_55510.1_41635.t1 | gi|260823848|ref|XP_002606880.1| | hypothetical protein BRAFLDRAFT_60329 [Branchiostoma floridae] | 2.94273e-44 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_55510.1_41635.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_55510.1_41635.t1 ataagttgaaggaatttaacggtaaagtagactctggtatacagctgtcagacacccaacttgacggtatacataaaatg ctggaaggaaccacggttacagaggagagcatgaatacactactggaagtcctttacaggtggcctccagaatacatatt tccaggattagacgtactaaggataaccatcaggaatcccaaagtttgtcagaaattctgtaatgtggaagattttctgg agagacagttaggctatcttactaatgatacaccagctcccgctcaaatgttaacgcttagaactttctgtaatatgttc aaacagccgtcaggagagaaaatccttgtagcaaacagagatcgtgttattactccttcccttaactgtagactaactca aaacaaaaacattcaaatagctctatgtacgctactgttaaattattccgtctatctccaaaacaaagtggacgaggaag ccaagtcgcagtgtctcctagccatcgccagtgtactagagaacccgttagattccgaggctcagttccgtttactggtc agtctgggcacgctcatgtccagtgatgatggagtcagagccctcgctcagtcactcgagatagaaaacctagtatcacc gctacaaaacacggtagaaccaaagaagctcccagactgtgccagttatatcctgaagctactcagatga |
|
Protein
| Protein ID | pfu_aug1.0_55510.1_41635.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_55510.1_41635.t1 KLKEFNGKVDSGIQLSDTQLDGIHKMLEGTTVTEESMNTLLEVLYRWPPEYIFPGLDVLRITIRNPKVCQKFCNVEDFLE RQLGYLTNDTPAPAQMLTLRTFCNMFKQPSGEKILVANRDRVITPSLNCRLTQNKNIQIALCTLLLNYSVYLQNKVDEEA KSQCLLAIASVLENPLDSEAQFRLLVSLGTLMSSDDGVRALAQSLEIENLVSPLQNTVEPKKLPDCASYILKLLR |
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