Gene
| Gene Model ID | pfu_aug1.0_5553.1_09143 |
|---|---|
| Locus | scaffold5553.1 : 107400 ... 126741 : - |
| To GenomeBrowser | scaffold5553.1:107400..126741 |
| Genes list of scaffold | scaffold5553.1 |
| Synonym | pfu_aug2.0_1153.1_11472 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5553.1_09143.t1 | 1 | 1 | AhpC-TSA | 2 | 86 | 6.2e-06 | 25.9 | 9.5e-10 | 7.0e-06 | 25.7 |
| pfu_aug1.0_5553.1_09143.t1 | 1 | 1 | Redoxin | 6 | 95 | 3.6e-20 | 72.0 | 5.3e-24 | 3.9e-20 | 71.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5553.1_09143.t1 | gi|115745775|ref|XP_001204236.1| | 3.0e-38 |
Transcript
| Transcript ID | pfu_aug1.0_5553.1_09143.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5553.1_09143.t1 acccacttacctggctatgtagcagatagtgacaaaataaaggcaaaaaatgtgacatcagtcgtttgtatatcagtcaa cgatccattcgtcatggaggcatggggaaaagctcatgatgccacaggaaaggtacgaatgcttgccgacccagctggag aattcacgaaggcaattgattgtgcactagatgcgacagccatccttggtaatgtcagatctaaaagatactccatggtt gtagaaaatggcaaggtaacaaagtttaatttagaacctgacggtactggattaacgtgctctctagcacctgagattct caaggaattgtag |
|
Protein
| Protein ID | pfu_aug1.0_5553.1_09143.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5553.1_09143.t1 THLPGYVADSDKIKAKNVTSVVCISVNDPFVMEAWGKAHDATGKVRMLADPAGEFTKAIDCALDATAILGNVRSKRYSMV VENGKVTKFNLEPDGTGLTCSLAPEILKEL |
|