Gene
Gene Model ID | pfu_aug1.0_5553.1_09143 |
---|---|
Locus | scaffold5553.1 : 107400 ... 126741 : - |
To GenomeBrowser | scaffold5553.1:107400..126741 |
Genes list of scaffold | scaffold5553.1 |
Synonym | pfu_aug2.0_1153.1_11472 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5553.1_09143.t1 | 1 | 1 | AhpC-TSA | 2 | 86 | 6.2e-06 | 25.9 | 9.5e-10 | 7.0e-06 | 25.7 |
pfu_aug1.0_5553.1_09143.t1 | 1 | 1 | Redoxin | 6 | 95 | 3.6e-20 | 72.0 | 5.3e-24 | 3.9e-20 | 71.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_5553.1_09143.t1 | gi|115745775|ref|XP_001204236.1| | 3.0e-38 |
Transcript
Transcript ID | pfu_aug1.0_5553.1_09143.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5553.1_09143.t1 acccacttacctggctatgtagcagatagtgacaaaataaaggcaaaaaatgtgacatcagtcgtttgtatatcagtcaa cgatccattcgtcatggaggcatggggaaaagctcatgatgccacaggaaaggtacgaatgcttgccgacccagctggag aattcacgaaggcaattgattgtgcactagatgcgacagccatccttggtaatgtcagatctaaaagatactccatggtt gtagaaaatggcaaggtaacaaagtttaatttagaacctgacggtactggattaacgtgctctctagcacctgagattct caaggaattgtag |
Protein
Protein ID | pfu_aug1.0_5553.1_09143.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5553.1_09143.t1 THLPGYVADSDKIKAKNVTSVVCISVNDPFVMEAWGKAHDATGKVRMLADPAGEFTKAIDCALDATAILGNVRSKRYSMV VENGKVTKFNLEPDGTGLTCSLAPEILKEL |