Gene
| Gene Model ID | pfu_aug1.0_5556.1_30985 |
|---|---|
| Locus | scaffold5556.1 : 10036 ... 19530 : + |
| To GenomeBrowser | scaffold5556.1:10036..19530 |
| Genes list of scaffold | scaffold5556.1 |
| Synonym | pfu_aug2.0_162.1_07070 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5556.1_30985.t1 | 1 | 1 | GCV_T | 30 | 156 | 7.7e-35 | 120.1 | 1.4e-38 | 1.0e-34 | 119.7 |
| pfu_aug1.0_5556.1_30985.t1 | 1 | 1 | GCV_T_C | 166 | 258 | 4.6e-22 | 77.8 | 1.2e-25 | 8.9e-22 | 76.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5556.1_30985.t1 | gi|115657906|ref|XP_785085.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_5556.1_30985.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5556.1_30985.t1 atgtcagatctgctgctggtctgtttgatgtctcccacatgttacaaaccagaattcatgaagagagaacttgaatgtaa gaagaagggaatggatattgaagttgaggttctctgcaatggacttctagctctccaaggacctgcaatggcgagagttt tacaagagggagtagactttgatttatcacaacttccgtttatgaccaacaaggtgatggatgtgtttggaattccagga tgccgagtcacaagatgtggttatactggagaggatggcgtggagatttcagtagacagtgacaaaactgagagtctggc agaggctttaataaattccaagcaaggtgaagtccatctcactggtctgggagcaagagacagcttacgtttagaggcag gattgtgcctatatggaaacgacatagacgaaaatacatcacctgtagaagcttctctcacttggacgatagggaaaaga agaaaagaattagccaattttccaggagcatctgtcatcctcaaccaaatcaaaaacaaaccaagcagaagaagagttgg ttttctatctcagggccctcctgttagaggtcatacaaagatctatgatgaatctggtagtgaggtgataggagaggtta caagtggatgtccttcaccttccctcaaacagaatgtatccatgggatatgtgaaattaccttacaccaaaaatggtaca aaggtcaagtttgaagtcaggaagaaaatggtggatggagtagtaactaaaatgccatttgtgccatcaaactatttcat tccaaagaaaaattaa |
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Protein
| Protein ID | pfu_aug1.0_5556.1_30985.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5556.1_30985.t1 MSDLLLVCLMSPTCYKPEFMKRELECKKKGMDIEVEVLCNGLLALQGPAMARVLQEGVDFDLSQLPFMTNKVMDVFGIPG CRVTRCGYTGEDGVEISVDSDKTESLAEALINSKQGEVHLTGLGARDSLRLEAGLCLYGNDIDENTSPVEASLTWTIGKR RKELANFPGASVILNQIKNKPSRRRVGFLSQGPPVRGHTKIYDESGSEVIGEVTSGCPSPSLKQNVSMGYVKLPYTKNGT KVKFEVRKKMVDGVVTKMPFVPSNYFIPKKN |
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