Gene
| Gene Model ID | pfu_aug1.0_5561.1_59807 |
|---|---|
| Locus | scaffold5561.1 : 6593 ... 16805 : - |
| To GenomeBrowser | scaffold5561.1:6593..16805 |
| Genes list of scaffold | scaffold5561.1 |
| Synonym | pfu_aug2.0_348.1_27257 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5561.1_59807.t1 | 1 | 1 | SBP_bac_3 | 27 | 241 | 3.5e-16 | 59.1 | 1.2e-19 | 1.8e-15 | 56.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5561.1_59807.t1 | gi|291221046|ref|XP_002730530.1| | 9.0e-28 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5561.1_59807.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5561.1_59807.t1 atgagaccatccaggattgagttatcgtgtttactgttgataatatttgtcataacgtcgactaatgcaaagacttggac atttgcagttaatggaaacagaaggccttatcattttatcgatgaacaaggtcacgtgataggggcggatctagacttag taagagaagtttgcaaaattgccgggaagaaatgtgaagtaacagtccaaccaacgtcagcatgtacaattaccatacaa ggtcgggtttttcccggggaagggttaatggctggatggtttgacgggtgtatgggttttgttagctcgccagagcggat gaattctgtggagtttacagatcctttccgtattcagcaatcctccttcgccgtacagcggggaaatcctaaaggattca atccagcagacatttcaaattctatcataacttaccttgacggtgcatacacaaatgaggaatgcttgaaacgtttgaac attggaaccccaaaacaaattattgttgctaaaggtattctggaggggagagaacttatgctaaacggaaccgcggatgc tttgttttctcctcggacagcgtttaggagacttgatgtactggatacaaagtatcgttgtgattccaaggggacggggg tcatgatcaaaaaggggagtgatctagcctcatggtggaacccagctttcaaggtgttctacgaatctggaagatacaca aaacattgtgcaactatcaacgagaagtataagggaattggagaccccacaaagacctgtctcccgccaatcaagtctag gaaggtcagggccattattatagatcctaggtcatcgtcttcgaaaccatttctcaattttgcagttgccatagcaacag tttcatcagttttatcagttttgggttga |
|
Protein
| Protein ID | pfu_aug1.0_5561.1_59807.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5561.1_59807.t1 MRPSRIELSCLLLIIFVITSTNAKTWTFAVNGNRRPYHFIDEQGHVIGADLDLVREVCKIAGKKCEVTVQPTSACTITIQ GRVFPGEGLMAGWFDGCMGFVSSPERMNSVEFTDPFRIQQSSFAVQRGNPKGFNPADISNSIITYLDGAYTNEECLKRLN IGTPKQIIVAKGILEGRELMLNGTADALFSPRTAFRRLDVLDTKYRCDSKGTGVMIKKGSDLASWWNPAFKVFYESGRYT KHCATINEKYKGIGDPTKTCLPPIKSRKVRAIIIDPRSSSSKPFLNFAVAIATVSSVLSVLG |
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