Gene
| Gene Model ID | pfu_aug1.0_5565.1_67280 |
|---|---|
| Locus | scaffold5565.1 : 24465 ... 32949 : - |
| To GenomeBrowser | scaffold5565.1:24465..32949 |
| Genes list of scaffold | scaffold5565.1 |
| Synonym | pfu_aug2.0_181.1_03756 |
Manual annotation
| Study field | other |
|---|---|
| Gene name | calmodulin like |
| Description | Blast best hit to NCBI CAA05092.1 (Branchiostoma lanceolatum) |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5565.1_67280.t1 | 3 | 1 | EF-hand_1 | 1 | 15 | 8.9e-24 | 80.9 | 1.8e-05 | 0.026 | 13.7 |
| pfu_aug1.0_5565.1_67280.t1 | 2 | 1 | EF-hand_7 | 1 | 13 | 9.1e-22 | 76.9 | 0.0094 | 14.0 | 5.9 |
| pfu_aug1.0_5565.1_67280.t1 | 2 | 1 | EF-hand_8 | 1 | 42 | 7.9e-20 | 70.2 | 6.3e-09 | 9.4e-06 | 25.1 |
| pfu_aug1.0_5565.1_67280.t1 | 3 | 1 | EF-hand_6 | 1 | 15 | 1.0e-15 | 56.0 | 0.0075 | 11.0 | 6.2 |
| pfu_aug1.0_5565.1_67280.t1 | 3 | 1 | EF-hand_5 | 2 | 13 | 7.1e-16 | 56.7 | 0.0042 | 6.2 | 6.3 |
| pfu_aug1.0_5565.1_67280.t1 | 3 | 2 | EF-hand_1 | 25 | 53 | 8.9e-24 | 80.9 | 1.1e-13 | 1.7e-10 | 39.4 |
| pfu_aug1.0_5565.1_67280.t1 | 3 | 2 | EF-hand_6 | 25 | 54 | 1.0e-15 | 56.0 | 3.4e-13 | 5.1e-10 | 38.3 |
| pfu_aug1.0_5565.1_67280.t1 | 2 | 2 | EF-hand_7 | 26 | 85 | 9.1e-22 | 76.9 | 6.3e-23 | 9.3e-20 | 70.5 |
| pfu_aug1.0_5565.1_67280.t1 | 3 | 2 | EF-hand_5 | 26 | 50 | 7.1e-16 | 56.7 | 5.4e-11 | 8.0e-08 | 31.2 |
| pfu_aug1.0_5565.1_67280.t1 | 2 | 2 | EF-hand_8 | 38 | 83 | 7.9e-20 | 70.2 | 2.2e-17 | 3.3e-14 | 52.2 |
| pfu_aug1.0_5565.1_67280.t1 | 3 | 3 | EF-hand_1 | 61 | 83 | 8.9e-24 | 80.9 | 4.6e-10 | 6.9e-07 | 28.1 |
| pfu_aug1.0_5565.1_67280.t1 | 3 | 3 | EF-hand_5 | 65 | 82 | 7.1e-16 | 56.7 | 2.4e-06 | 0.0035 | 16.6 |
| pfu_aug1.0_5565.1_67280.t1 | 3 | 3 | EF-hand_6 | 67 | 83 | 1.0e-15 | 56.0 | 0.00035 | 0.53 | 10.3 |
Transcript
| Transcript ID | pfu_aug1.0_5565.1_67280.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5565.1_67280.t1 ggaacggaacgatagactttccagaatttttaactatgatgtcaaggaaaatgaaagacacagactccgaggaagaactt cgggaagccttcagagttttcgataaagacggaaacgggtttataagtgctgctgaattacgtcacgtgatgacgaatct tggggaaaaactgacggacgaggaggtcgatgaaatgatcagggaagcggatattgacggcgacggacaagtcaattacg aagaattgtttatatttttctactga |
|
Protein
| Protein ID | pfu_aug1.0_5565.1_67280.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5565.1_67280.t1 NGTIDFPEFLTMMSRKMKDTDSEEELREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE ELFIFFY |
|