Gene
Gene Model ID | pfu_aug1.0_55659.1_05582 |
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Locus | scaffold55659.1 : 1 ... 1445 : - |
To GenomeBrowser | scaffold55659.1:1..1445 |
Genes list of scaffold | scaffold55659.1 |
Synonym | NA |
Manual annotation
Study field | Reproduction |
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Gene name | C1q domain containing protein |
Description | Best hit to MgC1q52. 97 bits, 1e-18 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_55659.1_05582.t1 | 2 | 1 | C1q | 16 | 43 | 4.3e-23 | 81.7 | 0.31 | 2300.0 | -1.5 |
pfu_aug1.0_55659.1_05582.t1 | 2 | 2 | C1q | 57 | 185 | 4.3e-23 | 81.7 | 1.2e-26 | 9.2e-23 | 80.6 |
Transcript
Transcript ID | pfu_aug1.0_55659.1_05582.t1 |
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Definition | - |
>pfu_aug1.0_55659.1_05582.t1 atgaaatgcagttgtagcaacgttggacctcttagcactgttgtcatttcaaacaccagacaagaattggcaactatcac taacacaattaaaacaataaactcaaaccttgccattttggaactaatgaagctgcagcgaaattgctcacatacaagaa ctgatgttgcatttcaagcaactttggttaaatctatctccaccacgcagggaagacattctacagtcgtctttgaccat gtggatataaacgaaggaaatggatatagtgtcaaaaccggtaaattcacagcacccagggatgggatctacgtttttca ttggacttgtatgacccatactgaaaaagtgttcagaaccgaattggccgtgaatggaaaacgcaaagttggaaaccatg ctgcatcgcgagtaaaacctgcagatgatcacgataccggaagccagacgtatgtaggtcgcctatcaaaggatgaccaa gtctggatcagaacctttgcaggagaaacatatctgaggggcgatgggtggtctgcattctctggatacatactgtaa |
Protein
Protein ID | pfu_aug1.0_55659.1_05582.t1 |
---|---|
Definition | - |
>pfu_aug1.0_55659.1_05582.t1 MKCSCSNVGPLSTVVISNTRQELATITNTIKTINSNLAILELMKLQRNCSHTRTDVAFQATLVKSISTTQGRHSTVVFDH VDINEGNGYSVKTGKFTAPRDGIYVFHWTCMTHTEKVFRTELAVNGKRKVGNHAASRVKPADDHDTGSQTYVGRLSKDDQ VWIRTFAGETYLRGDGWSAFSGYIL |