Gene
| Gene Model ID | pfu_aug1.0_55659.1_05582 |
|---|---|
| Locus | scaffold55659.1 : 1 ... 1445 : - |
| To GenomeBrowser | scaffold55659.1:1..1445 |
| Genes list of scaffold | scaffold55659.1 |
| Synonym | NA |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | C1q domain containing protein |
| Description | Best hit to MgC1q52. 97 bits, 1e-18 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_55659.1_05582.t1 | 2 | 1 | C1q | 16 | 43 | 4.3e-23 | 81.7 | 0.31 | 2300.0 | -1.5 |
| pfu_aug1.0_55659.1_05582.t1 | 2 | 2 | C1q | 57 | 185 | 4.3e-23 | 81.7 | 1.2e-26 | 9.2e-23 | 80.6 |
Transcript
| Transcript ID | pfu_aug1.0_55659.1_05582.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_55659.1_05582.t1 atgaaatgcagttgtagcaacgttggacctcttagcactgttgtcatttcaaacaccagacaagaattggcaactatcac taacacaattaaaacaataaactcaaaccttgccattttggaactaatgaagctgcagcgaaattgctcacatacaagaa ctgatgttgcatttcaagcaactttggttaaatctatctccaccacgcagggaagacattctacagtcgtctttgaccat gtggatataaacgaaggaaatggatatagtgtcaaaaccggtaaattcacagcacccagggatgggatctacgtttttca ttggacttgtatgacccatactgaaaaagtgttcagaaccgaattggccgtgaatggaaaacgcaaagttggaaaccatg ctgcatcgcgagtaaaacctgcagatgatcacgataccggaagccagacgtatgtaggtcgcctatcaaaggatgaccaa gtctggatcagaacctttgcaggagaaacatatctgaggggcgatgggtggtctgcattctctggatacatactgtaa |
|
Protein
| Protein ID | pfu_aug1.0_55659.1_05582.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_55659.1_05582.t1 MKCSCSNVGPLSTVVISNTRQELATITNTIKTINSNLAILELMKLQRNCSHTRTDVAFQATLVKSISTTQGRHSTVVFDH VDINEGNGYSVKTGKFTAPRDGIYVFHWTCMTHTEKVFRTELAVNGKRKVGNHAASRVKPADDHDTGSQTYVGRLSKDDQ VWIRTFAGETYLRGDGWSAFSGYIL |
|