Gene
| Gene Model ID | pfu_aug1.0_557.1_29331 |
|---|---|
| Locus | scaffold557.1 : 28096 ... 44367 : + |
| To GenomeBrowser | scaffold557.1:28096..44367 |
| Genes list of scaffold | scaffold557.1 |
| Synonym | pfu_aug2.0_3171.1_05772 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_557.1_29331.t1 | 1 | 1 | cwf18 | 6 | 131 | 1.6e-38 | 132.1 | 1.3004e-42 | 1.9e-38 | 131.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_557.1_29331.t1 | gi|66563505|ref|XP_623598.1| | PREDICTED: coiled-coil domain-containing protein 12-like isoform 1 [Apis mellifera] | 7.0e-40 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_557.1_29331.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_557.1_29331.t1 atgtccaacgttggaaaattaggagatgcggcactaaaaagaagagaacggttgttggctttgaagaataagaagcagaa tgatggaaatcagtcacacgatcctgattctgaagaaaaactacctcggccagttttcaggagttacaagccccaagatg aaggccttaaggactccaccttagaacctgctaaaccaggagatgtgacagagaagattcagcctcagttagaagccact aagattacagttaacgttggagaagatgttgatttgattaacttggcaccaaggaaaccagactgggatctcaaaagaga tgtagcgaaaaaattagaaaaattggaaagaagaacacaaaaagcaatagcagagctcatacgagaacggttaaaagcca gtaatgaagatttagcccttgtggtaaatgccggtgaagtgcaagcaagagctgaagaagaagaagactga |
|
Protein
| Protein ID | pfu_aug1.0_557.1_29331.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_557.1_29331.t1 MSNVGKLGDAALKRRERLLALKNKKQNDGNQSHDPDSEEKLPRPVFRSYKPQDEGLKDSTLEPAKPGDVTEKIQPQLEAT KITVNVGEDVDLINLAPRKPDWDLKRDVAKKLEKLERRTQKAIAELIRERLKASNEDLALVVNAGEVQARAEEEED |
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