Gene
| Gene Model ID | pfu_aug1.0_5570.1_52574 |
|---|---|
| Locus | scaffold5570.1 : 45246 ... 53597 : + |
| To GenomeBrowser | scaffold5570.1:45246..53597 |
| Genes list of scaffold | scaffold5570.1 |
| Synonym | pfu_aug2.0_1707.1_25098 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5570.1_52574.t1 | 1 | 1 | F-box | 100 | 140 | 3.2e-09 | 36.2 | 8.6e-13 | 3.2e-09 | 36.2 |
| pfu_aug1.0_5570.1_52574.t1 | 1 | 1 | F-box-like | 102 | 143 | 2.0e-15 | 56.2 | 1.0e-18 | 3.8e-15 | 55.3 |
| pfu_aug1.0_5570.1_52574.t1 | 2 | 1 | Beta_helix | 214 | 341 | 3.4e-31 | 108.1 | 7.2e-18 | 2.7e-14 | 53.2 |
| pfu_aug1.0_5570.1_52574.t1 | 2 | 1 | NosD | 214 | 333 | 7.7e-20 | 71.0 | 7.3e-13 | 2.7e-09 | 36.5 |
| pfu_aug1.0_5570.1_52574.t1 | 2 | 2 | NosD | 325 | 443 | 7.7e-20 | 71.0 | 4.0e-14 | 1.5e-10 | 40.6 |
| pfu_aug1.0_5570.1_52574.t1 | 2 | 2 | Beta_helix | 338 | 453 | 3.4e-31 | 108.1 | 1.4e-20 | 5.3e-17 | 62.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5570.1_52574.t1 | gi|170032817|ref|XP_001844276.1| | f-box only protein [Culex quinquefasciatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_5570.1_52574.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5570.1_52574.t1 atgtcgactccaaccacaagaactacaagaaatagttctcgaaaggtacgatgtcgcaaaatttccaagcaggcctcaag tagactccaaaattacggtgatgatatggatagacattcttctgaagaaatgaatgaaagactgccaagaggtagatact atctacgcaaacgttcatctgaatctgacggatgccagtctttgtcagaaccaggttcaagttcaggaaagcatagacgg aagtcctcatctcgttcaaatgcttgctccaaagttggtgctcaatacctacaggatgaatttcctgatgaagtcttgct gaagattttcagttacttgttggaatatgatttatgcagagttgcatgtgtatgcagacgcttcaagattatagccaatg acattgagttatggaaaacaatgtatcaggatgtgtttgagtatgattacccgctgatgaatccagagccaatggtgttc cgctttgtacagccagatgagcacgagtacaataatccatggaaagaaagcttcagacagctgcgaagagggactcatgt acgacagggttatgatgattgtcagtataaaggcagagacattatgtttacaccagacctgacttcctcactaccccaca acaagcattatgccttggaggttacagaaaactgttctcctgtcattgaccattgtaagattaaaagtctctccgttgtt ggtgctgctgtctcagtatctggctctaatgctgatcctgtcgttaaacactgtaaaatcaaagactgtgaaaatgttgg cctctttgttgctgattacgcacagggcacatacgaggacaatgaaatcagtggtaatgctctagctggtatctgggtaa agaaccacgctaatcccattatgaggaggaataacattcaccatggaagggacgtgggtatttttatatttgaaaatggc ttaggatatttcgaggccaatgacattcacaataatcgtatagccgggtttgaagtgaagggagctaacccaactgttgt tcgttgtgagatccatcatggacagacaggtggagtgtacgtccatgacaacgggcgaggacagttcatagagaataaaa ttcactccaataattttgccggtgtgtggattacatcaaatagtgatccaaccattaggaaaaatgaaatattcaatggg catcaaggtggagtatacatatttggagaaggaaggggtctcatagagtacaataatatatatggtaatgccttagcggg aattcagatccgaactaacagcaatcctattgtatggcataatgaaatccatcatggacagcatggaggcatctatgtgg taaatattttttttcactatcaaag |
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Protein
| Protein ID | pfu_aug1.0_5570.1_52574.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5570.1_52574.t1 MSTPTTRTTRNSSRKVRCRKISKQASSRLQNYGDDMDRHSSEEMNERLPRGRYYLRKRSSESDGCQSLSEPGSSSGKHRR KSSSRSNACSKVGAQYLQDEFPDEVLLKIFSYLLEYDLCRVACVCRRFKIIANDIELWKTMYQDVFEYDYPLMNPEPMVF RFVQPDEHEYNNPWKESFRQLRRGTHVRQGYDDCQYKGRDIMFTPDLTSSLPHNKHYALEVTENCSPVIDHCKIKSLSVV GAAVSVSGSNADPVVKHCKIKDCENVGLFVADYAQGTYEDNEISGNALAGIWVKNHANPIMRRNNIHHGRDVGIFIFENG LGYFEANDIHNNRIAGFEVKGANPTVVRCEIHHGQTGGVYVHDNGRGQFIENKIHSNNFAGVWITSNSDPTIRKNEIFNG HQGGVYIFGEGRGLIEYNNIYGNALAGIQIRTNSNPIVWHNEIHHGQHGGIYVVNIFFHYQ |
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