Gene
| Gene Model ID | pfu_aug1.0_5603.1_59817 |
|---|---|
| Locus | scaffold5603.1 : 32100 ... 42075 : - |
| To GenomeBrowser | scaffold5603.1:32100..42075 |
| Genes list of scaffold | scaffold5603.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5603.1_59817.t1 | 2 | 1 | zf-C3HC4_3 | 26 | 67 | 5.8e-19 | 67.5 | 1.3e-12 | 4.0e-09 | 36.0 |
| pfu_aug1.0_5603.1_59817.t1 | 2 | 1 | zf-C3HC4_2 | 27 | 61 | 4.7e-06 | 26.5 | 1.3e-06 | 0.0039 | 17.1 |
| pfu_aug1.0_5603.1_59817.t1 | 2 | 2 | zf-C3HC4_3 | 210 | 251 | 5.8e-19 | 67.5 | 6.8e-13 | 2.0e-09 | 36.9 |
| pfu_aug1.0_5603.1_59817.t1 | 2 | 2 | zf-C3HC4_2 | 211 | 245 | 4.7e-06 | 26.5 | 4.2e-06 | 0.012 | 15.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5603.1_59817.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5603.1_59817.t1 atgactccacaacagaaagcagccagtgatatggcacatgctatgggggaattgttccaagaacttctcgttctgccgtg tgcagtatgcaaggaaaatgtggctaatgctaagtttctaccctgtaaacataaggtcacgtgccgtggatgctgcttcc gcgtgaacaggtgtccactatgtcatcaacccgtagacgaacgctgtgatacacaaacgaatattccgattaggcgagaa aatctgttgatacctgatctacccaaccggaatttctttgactttaagctccgaaggatagatactgctcaggtaatccg cgaattttggattattgatggacaacacatcgtctttgtatctattttgcagctcgtgggacttgcagtaaataacagag aattagaaaatgagaaattcaagatggttgtgatgcttcttgaaaacggagcagatttcaaagcaacaaataacatgggt cagaatcctctacaggtctgttccagcgacatacttaagaaagctgtggtagaggtcattgaaaaaaggcgaatgacacc tcaacagagagccaccaaccagatggcacaagcgatgggggaactgttacaagaactgcttgtcctgccatgtgcagtat gcaaggaaaatagagctaataccgtgcttcttccatgtgaacacaaggtcacgtgtcatggatgctgtttccgtgtcgac acatgtccattatgtcacgaatctgtagaacaacgctgtgatacacagggacgaagaatcatccaagacccatgccaagt acagtga |
|
Protein
| Protein ID | pfu_aug1.0_5603.1_59817.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5603.1_59817.t1 MTPQQKAASDMAHAMGELFQELLVLPCAVCKENVANAKFLPCKHKVTCRGCCFRVNRCPLCHQPVDERCDTQTNIPIRRE NLLIPDLPNRNFFDFKLRRIDTAQVIREFWIIDGQHIVFVSILQLVGLAVNNRELENEKFKMVVMLLENGADFKATNNMG QNPLQVCSSDILKKAVVEVIEKRRMTPQQRATNQMAQAMGELLQELLVLPCAVCKENRANTVLLPCEHKVTCHGCCFRVD TCPLCHESVEQRCDTQGRRIIQDPCQVQ |
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