Gene
| Gene Model ID | pfu_aug1.0_5605.1_59819 |
|---|---|
| Locus | scaffold5605.1 : 7466 ... 17382 : + |
| To GenomeBrowser | scaffold5605.1:7466..17382 |
| Genes list of scaffold | scaffold5605.1 |
| Synonym | pfu_aug2.0_1330.1_01550 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5605.1_59819.t1 | 1 | 1 | Bax1-I | 1 | 135 | 1.5e-18 | 67.1 | 1.1e-22 | 1.6e-18 | 67.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5605.1_59819.t1 | gi|225706054|gb|ACO08873.1| | Growth hormone-inducible transmembrane protein [Osmerus mordax] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5605.1_59819.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5605.1_59819.t1 atgtattttggggggagtgtaggacttactgcgttatcagctgtagccgtcagtaaatcaccagcactcatgaatctcat gatgaaaaattcactcctggctattggtgctacgtttgctgtaatgatcggctctgggatggtacttaggtctattccgt acaaggagggactcgggaagaagcaactggcgtggatgacccactgtgggattatgggagctatcgttgccccgctgacg atgcttggtggccctctcctggttagagccgcatggtatacagcaggaattgttggagggctgtcagctgttgctatgtg tgctcccagtgagaagttcctgaacatgggtggacccctggcctgtggactgggcgtggtctttgtttcctctataggta ggttaacacagatatcagatacaatgtag |
|
Protein
| Protein ID | pfu_aug1.0_5605.1_59819.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5605.1_59819.t1 MYFGGSVGLTALSAVAVSKSPALMNLMMKNSLLAIGATFAVMIGSGMVLRSIPYKEGLGKKQLAWMTHCGIMGAIVAPLT MLGGPLLVRAAWYTAGIVGGLSAVAMCAPSEKFLNMGGPLACGLGVVFVSSIGRLTQISDTM |
|