Gene
| Gene Model ID | pfu_aug1.0_5620.1_38182 |
|---|---|
| Locus | scaffold5620.1 : 3967 ... 20305 : - |
| To GenomeBrowser | scaffold5620.1:3967..20305 |
| Genes list of scaffold | scaffold5620.1 |
| Synonym | pfu_aug2.0_735.1_17779 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5620.1_38182.t1 | 1 | 1 | Auto_anti-p27 | 64 | 87 | 1.7e-08 | 34.0 | 1.7e-12 | 2.5e-08 | 33.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5620.1_38182.t1 | gi|348564976|ref|XP_003468280.1| | PREDICTED: Sjoegren syndrome/scleroderma autoantigen 1 [Cavia porcellus] | 5.0e-13 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5620.1_38182.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5620.1_38182.t1 atgatgtggattatgcccccgcatgccccggatccgccaccagaaaataaagagatgccagtcagagacagcagtgcgtt gaacagaaagggacggaaaaggccgataagtgaaactctagatgattttgactgggaaccaaatgaggcggagagaaaat tactgcaggctcggagagacagatcggataaaattagtaagataatgggagactacctgcttaaaggatacaaaatgtta gctacatcatgtgatgaatgctcgtttagtcgatctcctttgaagtcatttcagatagttttgctcactttgaaaatcat cactgtgagtgtgaatagttataactctgctattggttcaaacattggaccatctgaccttgagctttga |
|
Protein
| Protein ID | pfu_aug1.0_5620.1_38182.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5620.1_38182.t1 MMWIMPPHAPDPPPENKEMPVRDSSALNRKGRKRPISETLDDFDWEPNEAERKLLQARRDRSDKISKIMGDYLLKGYKML ATSCDECSFSRSPLKSFQIVLLTLKIITVSVNSYNSAIGSNIGPSDLEL |
|