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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5623.1_30993
Locus scaffold5623.1 : 28625 ... 33955 : -
To GenomeBrowser scaffold5623.1:28625..33955
Genes list of scaffold scaffold5623.1
Synonym pfu_aug2.0_343.1_10636

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 3
egg-Dshape 1
trochophore 1
>Adult tissues
Dshape 1

Transcript
Transcript IDpfu_aug1.0_5623.1_30993.t1
Definition-
>pfu_aug1.0_5623.1_30993.t1
atgatcaaagtcatattaccgctctgcatattaggctacatttctgcaaacctgcaaacccatgaaaaagccttacacag
gtttgtcgggggtccagtgcagaaagctcaagtagccgccccagtcaataatgtggtcgctgcaccatctaccaatgttg
tcgtccagccaaagacccaggttacagtacaagctaacgctaatgtagtcggtggtgctggtgtaggtgcagcaagttta
ggtggggccggtttaggaggagtcggccgggtcgatcagctgacatttcctgctcaggctgctgttctcgggggcggtgc
cgtcggtagtattggtggtggagtgggtgttgcaggagttggacgtgtcccaagcattggtggcgctgttgtcgacggta
tcgatgatggtagttttctgggacttggcggcgtggatgacctcagcctcagtgtgggtgcagcaacaactggacaggtg
gctggcatcagcggcgctgtggttggcagcattgacgacggtagcttgtcacttggtggagtggatgaccttagcctcct
taacgacaacaatggtattgacgactcaaatggtcttcacggtaactttgatgatggagctgctgtcctggtcggcggtg
atgatacaaatggctttgatgaccgtctcggtgtcggattctcttctgatgtttccggtctcggcactaccgtaacacga
agaacgacctcaatcagagttggtaaacctcgtataagtatcagcaagggtagctttggagattataatggttttggaaa
gatcagatccaagggattcagcggtggatacagaaaaggcagcttaggtggatccatcggcggctttgtaggcattaata
aaggtggattttcaggaggaataggcaaaagcggattttcgaaaggaatgagcaaaggcgggttttccggaggaatgagc
aaaggtggattttccggatcagttgggaggtttgacggatttggcaatgacggattaattggtggccaaggatttagtgg
ggtaaacagcattggattcggcggacaaaacagttttgctttcggtgatgacaacggacatgacaacggacataacggac
atgacaacggacataatggtcatgacaacggacataatggacatgacaacggacatgacaacggacataatggccacgac
aacggacacaatggtcatgataacggtcataacggtcacaatggacatgacaacggacacaatgggcatgataacggtca
caacggacatgacaatggacataacggccatgacaatggacataatggacacaacggacacgacaacggacataatggtc
atgataacggacataatggtcatgataacggacacaatggtgacaacgggcataacggacatggaaacggacacaacggg
aaaggcggttacggacacaacggacacaatggtcatgacaacggacataatggtcacaatggacatggtaagggacacaa
cggctaccccatgggacacaatggacattcttacggacacaatggtggtcatggatatggtatgtcacatggaggatacc
caggttttagaccaggaggtttcggaggctatggcaaacaccgtgggggtttcggaggatactacggtccatcccctaaa
ggacattttggtatgatcggtggtggaaagcatggtggataccacaaaaatatgatcaaaggtcacacgggattcattga
tggtggtattcacgtgatcgatggaggagtagtctacgaaaaaccaattcattatggattcggaaagaaacactttggtg
gatatggaaagcgcatccgtcctgtgcccattcacaaaggattccctatccacaaaggaaaacatttcattggtggatac
gggaagccaatcatcggcggatatggtccaccaaagcacttgattggtggatatggtaaaccaatgtttggtggttatgg
aaagccaatgatccattatggaccaatcaagaaattccaacacaacagatattaa

Protein
Protein IDpfu_aug1.0_5623.1_30993.t1
Definition-
>pfu_aug1.0_5623.1_30993.t1
MIKVILPLCILGYISANLQTHEKALHRFVGGPVQKAQVAAPVNNVVAAPSTNVVVQPKTQVTVQANANVVGGAGVGAASL
GGAGLGGVGRVDQLTFPAQAAVLGGGAVGSIGGGVGVAGVGRVPSIGGAVVDGIDDGSFLGLGGVDDLSLSVGAATTGQV
AGISGAVVGSIDDGSLSLGGVDDLSLLNDNNGIDDSNGLHGNFDDGAAVLVGGDDTNGFDDRLGVGFSSDVSGLGTTVTR
RTTSIRVGKPRISISKGSFGDYNGFGKIRSKGFSGGYRKGSLGGSIGGFVGINKGGFSGGIGKSGFSKGMSKGGFSGGMS
KGGFSGSVGRFDGFGNDGLIGGQGFSGVNSIGFGGQNSFAFGDDNGHDNGHNGHDNGHNGHDNGHNGHDNGHDNGHNGHD
NGHNGHDNGHNGHNGHDNGHNGHDNGHNGHDNGHNGHDNGHNGHNGHDNGHNGHDNGHNGHDNGHNGDNGHNGHGNGHNG
KGGYGHNGHNGHDNGHNGHNGHGKGHNGYPMGHNGHSYGHNGGHGYGMSHGGYPGFRPGGFGGYGKHRGGFGGYYGPSPK
GHFGMIGGGKHGGYHKNMIKGHTGFIDGGIHVIDGGVVYEKPIHYGFGKKHFGGYGKRIRPVPIHKGFPIHKGKHFIGGY
GKPIIGGYGPPKHLIGGYGKPMFGGYGKPMIHYGPIKKFQHNRY

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