Gene
| Gene Model ID | pfu_aug1.0_5630.1_09175 |
|---|---|
| Locus | scaffold5630.1 : 1641 ... 6035 : - |
| To GenomeBrowser | scaffold5630.1:1641..6035 |
| Genes list of scaffold | scaffold5630.1 |
| Synonym | pfu_aug2.0_7771.1_06309 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5630.1_09175.t1 | 2 | 1 | zf-B_box | 16 | 58 | 2.9e-15 | 55.8 | 6.5e-08 | 8.7e-05 | 22.3 |
| pfu_aug1.0_5630.1_09175.t1 | 2 | 2 | zf-B_box | 74 | 112 | 2.9e-15 | 55.8 | 5.5e-13 | 7.4e-10 | 38.5 |
| pfu_aug1.0_5630.1_09175.t1 | 3 | 1 | NHL | 382 | 399 | 5.3e-07 | 29.2 | 0.051 | 68.0 | 3.6 |
| pfu_aug1.0_5630.1_09175.t1 | 3 | 2 | NHL | 479 | 501 | 5.3e-07 | 29.2 | 7.7e-07 | 0.001 | 18.8 |
| pfu_aug1.0_5630.1_09175.t1 | 3 | 3 | NHL | 526 | 545 | 5.3e-07 | 29.2 | 1.6e-05 | 0.022 | 14.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5630.1_09175.t1 | gi|291237190|ref|XP_002738518.1| | PREDICTED: tripartite motif-containing protein 2-like [Saccoglossus kowalevskii] | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_5630.1_09175.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5630.1_09175.t1 atgagtgacaacgaagcctcagcgattcctccccaaacattcgtggagtgtggccaatgtaaagggaacgtcaacacctc atggttttgtaagaactgtccttgctcactttgtgaaacatgtgctaccgcccacaagacatctcatcaatacaaatccc acacagtcgtaccaaggacatacaccgtcctccgattgtacggtccggcaaagttagcagaacagtgtcagatccatcca gaaaaagagatatcatccttctgcaacgactgtgccatcccgtgctgcgtaacttgtatggtgaacgatcataaacgcca tgatttctccaccatagaagacaagtacctggatgctgaaaaaggcttgaatgagtattaccgacagctggatactgatg tcagaccaacgcttgaaaagatggaggaacaagctagagcggatgtcaaggaagatgacagccatgttgagaaagtcata aatgaaattaacgatttccgaaaagatgtcgttcaaaattttaatacagcatgtgatgatctcattgttcaggttcaatc gttttcaagtaaaacaaatgaagggttgaaagaaattgaaacttcactgaaaaatcttgaacacataaagaaagaaattg aagataaaatagcaaggggaaatttagacctaattaaatatacacctcccaaattggatacacttgttcccaaatttaaa ggtccatcaaaggttgtcccaatttttgaaccttctaggaatctgtttgatttgatgaaaaagccagttggaattattca gtcaaaagaggtaaagaaagatgaaattaagagcagaaccataacaaatatcagatctgtacatgtacaaaaaagggctt catttgagagtaagataggtgtcatatccatgaccacagtaagtaacaacatgacctgggttatggattgtgataatcct accatgtacctgtataacgataagggtaaggtagttaggtctgtgacagtggaagaagccaacggtatcactggcatggc aatcacaaagtcaagggagatgatagtgacatgtgaagacaataaagtgaggcatgtatcagtgagtggtgaggtgtcta caatgatagatactgtgccattatactgttctggtgtgtgtctgactgacaaagaggagattgtagtttgtatgagtggt cagggtgatcagaaccacgtagctgtgtactcacctgatggacgtagtaagctacgtgagatacggggtagggacggtaa ggggaaataccttgttactgacccttaccgcgtggcaaagaatgaccaggatctgtgtatagttaattttggtaagaatg tggtatgtgtagatgagagagatagggtgaggtgggtgtatgacggtaaggaagctaaactaggaaattcatttggtcca cattgtatatgtgttgatcagcacaagaacttgctggtcactgatggaaataactactgtgtacattatatagacgggga gggaggactgatacaggtgatcatgtcagtagaacaaataggaatacggtttaattgggggatctgtgtagatgatgata caggacatgtctgggttggaaatagttctgggaatgttgtcattgctaaatacttagaataa |
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Protein
| Protein ID | pfu_aug1.0_5630.1_09175.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5630.1_09175.t1 MSDNEASAIPPQTFVECGQCKGNVNTSWFCKNCPCSLCETCATAHKTSHQYKSHTVVPRTYTVLRLYGPAKLAEQCQIHP EKEISSFCNDCAIPCCVTCMVNDHKRHDFSTIEDKYLDAEKGLNEYYRQLDTDVRPTLEKMEEQARADVKEDDSHVEKVI NEINDFRKDVVQNFNTACDDLIVQVQSFSSKTNEGLKEIETSLKNLEHIKKEIEDKIARGNLDLIKYTPPKLDTLVPKFK GPSKVVPIFEPSRNLFDLMKKPVGIIQSKEVKKDEIKSRTITNIRSVHVQKRASFESKIGVISMTTVSNNMTWVMDCDNP TMYLYNDKGKVVRSVTVEEANGITGMAITKSREMIVTCEDNKVRHVSVSGEVSTMIDTVPLYCSGVCLTDKEEIVVCMSG QGDQNHVAVYSPDGRSKLREIRGRDGKGKYLVTDPYRVAKNDQDLCIVNFGKNVVCVDERDRVRWVYDGKEAKLGNSFGP HCICVDQHKNLLVTDGNNYCVHYIDGEGGLIQVIMSVEQIGIRFNWGICVDDDTGHVWVGNSSGNVVIAKYLE |
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