Gene
| Gene Model ID | pfu_aug1.0_5630.1_09179 |
|---|---|
| Locus | scaffold5630.1 : 20976 ... 26064 : + |
| To GenomeBrowser | scaffold5630.1:20976..26064 |
| Genes list of scaffold | scaffold5630.1 |
| Synonym | pfu_aug2.0_450.1_00757 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5630.1_09179.t1 | 3 | 1 | Ank_2 | 6 | 66 | 6.8e-27 | 93.6 | 7.8e-15 | 1.6e-11 | 44.3 |
| pfu_aug1.0_5630.1_09179.t1 | 4 | 1 | Ank_5 | 6 | 37 | 3.1e-16 | 59.0 | 1.4e-06 | 0.0029 | 17.8 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 1 | Ank_4 | 6 | 25 | 4.7e-14 | 52.4 | 0.0058 | 12.0 | 6.5 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 1 | Ank | 8 | 33 | 6.0e-25 | 85.7 | 9.7e-09 | 2.1e-05 | 24.1 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 1 | Ank_3 | 8 | 32 | 6.7e-18 | 62.9 | 3.1e-06 | 0.0066 | 16.5 |
| pfu_aug1.0_5630.1_09179.t1 | 4 | 2 | Ank_5 | 24 | 67 | 3.1e-16 | 59.0 | 6.7e-09 | 1.4e-05 | 25.1 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 2 | Ank_4 | 31 | 60 | 4.7e-14 | 52.4 | 0.001 | 2.2 | 8.9 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 2 | Ank | 40 | 66 | 6.0e-25 | 85.7 | 2.6e-06 | 0.0056 | 16.4 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 2 | Ank_3 | 40 | 66 | 6.7e-18 | 62.9 | 4.5e-08 | 9.5e-05 | 22.2 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 3 | Ank_4 | 42 | 93 | 4.7e-14 | 52.4 | 3.8e-09 | 8.0e-06 | 26.2 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 3 | Ank | 74 | 100 | 6.0e-25 | 85.7 | 1.1e-08 | 2.4e-05 | 23.9 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 3 | Ank_3 | 74 | 100 | 6.7e-18 | 62.9 | 2.9e-05 | 0.062 | 13.5 |
| pfu_aug1.0_5630.1_09179.t1 | 4 | 3 | Ank_5 | 74 | 100 | 3.1e-16 | 59.0 | 0.00076 | 1.6 | 9.0 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 4 | Ank_4 | 74 | 102 | 4.7e-14 | 52.4 | 5.6e-06 | 0.012 | 16.1 |
| pfu_aug1.0_5630.1_09179.t1 | 3 | 2 | Ank_2 | 77 | 183 | 6.8e-27 | 93.6 | 1.2e-13 | 2.5e-10 | 40.5 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 4 | Ank_3 | 114 | 146 | 6.7e-18 | 62.9 | 0.065 | 140.0 | 3.2 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 4 | Ank | 131 | 149 | 6.0e-25 | 85.7 | 0.002 | 4.3 | 7.3 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 5 | Ank_4 | 134 | 169 | 4.7e-14 | 52.4 | 0.00064 | 1.4 | 9.5 |
| pfu_aug1.0_5630.1_09179.t1 | 4 | 4 | Ank_5 | 138 | 159 | 3.1e-16 | 59.0 | 6.8e-05 | 0.14 | 12.4 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 5 | Ank_3 | 151 | 182 | 6.7e-18 | 62.9 | 0.091 | 190.0 | 2.7 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 5 | Ank | 152 | 183 | 6.0e-25 | 85.7 | 0.044 | 93.0 | 3.1 |
| pfu_aug1.0_5630.1_09179.t1 | 3 | 3 | Ank_2 | 175 | 223 | 6.8e-27 | 93.6 | 0.022 | 47.0 | 4.4 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 6 | Ank | 209 | 223 | 6.0e-25 | 85.7 | 0.041 | 88.0 | 3.1 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 6 | Ank_3 | 209 | 221 | 6.7e-18 | 62.9 | 0.43 | 910.0 | 0.6 |
| pfu_aug1.0_5630.1_09179.t1 | 6 | 6 | Ank_4 | 211 | 225 | 4.7e-14 | 52.4 | 0.28 | 600.0 | 1.1 |
| pfu_aug1.0_5630.1_09179.t1 | 1 | 1 | SOCS_box | 255 | 294 | 3.6e-06 | 26.7 | 4.1e-09 | 8.6e-06 | 25.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5630.1_09179.t1 | gi|123429531|ref|XP_001307718.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 2.0e-16 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5630.1_09179.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5630.1_09179.t1 atgaattgttttgacacaatccctcttcatttggcgacggaatgtgatgacgtaaatattttggagtttttactcagaaa tggcgcgaatgcgaatgtgaattcaaaggacaaattaggatgttctgctctttatcgtgcaattaaaagtaaaaacttag acaaagttaaaattcttttggagaatggagctgatttgaaaccaatggaatattttgaaatgaccccattatgctctgct gtcatgatggagtcaccagaaattgtgcaggtgctgctaaatgccggagctgatccaaacgatacatatttatccggaat ggaaatgggaagttacagatgcagtctgttacatagagcacaaatgctgaaagaaagtttctttgagaagtcgagtacaa ttcttcaaatgctgatagaagcaggtgcccgtctgaaccaggaggacagttacggctatacaccaatacaacaatgtata aagaggtgtaaaacaaaagcctttaacatgacaaatcttagtctacttatcaaagcaggagcgaaactggagtctgtgga gcgtgtaagttattacaaaagcatcagcttggagtcttcattgtatttgctgcagtgttaccatcagtgggacgttatca gactcctagtggacgccggatgggagctacatcgggaaccctgtatggacattgtactagagaacgcacaggaacgcaac actgaaatatatgacatcaaggcgcttcatttacacctttatccacttatgtacttgtgccgcatcgccattaaacgtca tctgctgagatgtacccatgatagatctatttatacgagagtcttagaacttcctttacctagaaaactgagagattttg ttatgggtgttacataa |
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Protein
| Protein ID | pfu_aug1.0_5630.1_09179.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5630.1_09179.t1 MNCFDTIPLHLATECDDVNILEFLLRNGANANVNSKDKLGCSALYRAIKSKNLDKVKILLENGADLKPMEYFEMTPLCSA VMMESPEIVQVLLNAGADPNDTYLSGMEMGSYRCSLLHRAQMLKESFFEKSSTILQMLIEAGARLNQEDSYGYTPIQQCI KRCKTKAFNMTNLSLLIKAGAKLESVERVSYYKSISLESSLYLLQCYHQWDVIRLLVDAGWELHREPCMDIVLENAQERN TEIYDIKALHLHLYPLMYLCRIAIKRHLLRCTHDRSIYTRVLELPLPRKLRDFVMGVT |
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