Gene
| Gene Model ID | pfu_aug1.0_5642.1_30995 |
|---|---|
| Locus | scaffold5642.1 : 256 ... 21643 : + |
| To GenomeBrowser | scaffold5642.1:256..21643 |
| Genes list of scaffold | scaffold5642.1 |
| Synonym | pfu_aug2.0_642.1_07756 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5642.1_30995.t1 | 2 | 1 | C2 | 270 | 362 | 8.89965e-42 | 140.8 | 7.0e-24 | 1.0e-19 | 70.1 |
| pfu_aug1.0_5642.1_30995.t1 | 2 | 2 | C2 | 407 | 494 | 8.89965e-42 | 140.8 | 4.1e-24 | 6.0e-20 | 70.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5642.1_30995.t1 | gi|291223503|ref|XP_002731749.1| | PREDICTED: synaptotagmin-17-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5642.1_30995.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5642.1_30995.t1 atgcttccctttgttcttcgctcctgtgacgtcatactgtgtcgtaaaactacaaggtatgagcttgtaaatggcgttct ccacacgttaacaacagagcaaggactcaataccacatttaaagaaatccttatcttgactggtgagaaagccatccatt acaagtatgacgtcatcatcggactattcgaacgttatacgccagggcatgttccaaatatgaagattcgaacgttatac gccagggcatgttccaaatatgaagatatcatgttagagccaatcggcttgcaatccaaaaaatgtctgaagaagatatg ggaattcttctgctgtgatgatggatgttgcgagtgttgtataaaaagaaagaagaaaattcaaaaatctgacattcagc attccttcagagaatcttcacagaggctcgactctacaagctccgcggctgagtcacacagtagcagccgaagtttccga gatcgaattgaatccgatatctcatcacgaactgactccgtttcttccatgtctcaggtcagtggggattatagaagggg aacaaccacacccattattgacatgaaacccattgaattctgggctgcaaataaagagaacgtgcagccaaaacaacaca gacgacgtcttcctagtgagaccgagatcagcgtggagaactttcagcgagatctgtacgaggaggctccgagctctgaa ccttgtcttactgacgaggaaaaactagccaagtatcagctaggtcagattcacatagggctacaatacgatgtatcaac cagagttcttgtagtcaaagtcatcgaagccaaagatttacccccaccatactgtctcgatgaaaacaaacaagatatgg cgcattctaatccgtactgtaaagtttgcctgctgccagaccagaaaaattcacaacagacatctgtccaacgaaaaacc cagaatccgtcatggagtgaatacttcatgtttgagatgccttacagtgaagtacaaatgagaacactcgagattcttat aaaggattttgacaagtattcacgtcactgtgtaattggacaagtttatctgcctctcagcaacatcaatctcatcaagg gcggccacatgtggaaagcactctcaccaagtacaaaggagagacaagacctcggggaaattctgctgtcattaaactac cttcccggagcaggaagattaaatattgacgtcatcaaagctaagcagcttctacaaacagacatgattggaggatctga cccctttgttaaagttacaatggtacattttgaaaaaccgataaaaacgaagaagacatcttgcaagaaaaataccatag accccgttttcaacgaatccataagctttaacgtcacaccacaacaactagaaaataccagcatagtggtttccgtgtgg gactacaacacaaaaagtaaagacgattttgtcggtcgcattgtcataggaaaatatgggacgggccctcacgagttcac gcactggaaccggatgctcaattcacagagatctgcggttgcgcagtggcattctctcagatcgaggcaggaatgtgacc aagtctctccggcatccattgcagttccgtga |
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Protein
| Protein ID | pfu_aug1.0_5642.1_30995.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5642.1_30995.t1 MLPFVLRSCDVILCRKTTRYELVNGVLHTLTTEQGLNTTFKEILILTGEKAIHYKYDVIIGLFERYTPGHVPNMKIRTLY ARACSKYEDIMLEPIGLQSKKCLKKIWEFFCCDDGCCECCIKRKKKIQKSDIQHSFRESSQRLDSTSSAAESHSSSRSFR DRIESDISSRTDSVSSMSQVSGDYRRGTTTPIIDMKPIEFWAANKENVQPKQHRRRLPSETEISVENFQRDLYEEAPSSE PCLTDEEKLAKYQLGQIHIGLQYDVSTRVLVVKVIEAKDLPPPYCLDENKQDMAHSNPYCKVCLLPDQKNSQQTSVQRKT QNPSWSEYFMFEMPYSEVQMRTLEILIKDFDKYSRHCVIGQVYLPLSNINLIKGGHMWKALSPSTKERQDLGEILLSLNY LPGAGRLNIDVIKAKQLLQTDMIGGSDPFVKVTMVHFEKPIKTKKTSCKKNTIDPVFNESISFNVTPQQLENTSIVVSVW DYNTKSKDDFVGRIVIGKYGTGPHEFTHWNRMLNSQRSAVAQWHSLRSRQECDQVSPASIAVP |
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