Gene
| Gene Model ID | pfu_aug1.0_56422.1_41660 |
|---|---|
| Locus | scaffold56422.1 : 1613 ... 3065 : - |
| To GenomeBrowser | scaffold56422.1:1613..3065 |
| Genes list of scaffold | scaffold56422.1 |
| Synonym | pfu_aug2.0_571.1_04352 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_56422.1_41660.t1 | 1 | 1 | 7tm_1 | 69 | 316 | 6.2e-30 | 104.1 | 3.8e-33 | 8.0e-30 | 103.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_56422.1_41660.t1 | gi|260834117|ref|XP_002612058.1| | hypothetical protein BRAFLDRAFT_94148 [Branchiostoma floridae] | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_56422.1_41660.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_56422.1_41660.t1 atgacgtctacaagcaacactacagtcatggccaattcctttaaaaatgaaaacgctacggacaatgtgtacggaatata tgacccaaatggactaaaccgaattcccgcgctgatattttctacaacgcttcttgtagtggggaccattggcaacgccc atgctttgattattaacattcagcgatacagagagaggacgaccagacgaaataacaaaaacccgtatgttgtcttcgtt ttgagtttggcaatacttgatctgtttgtctgtactttcgttttgcctctcgatattattgacacttgtacacattttac tttgttatcacgtgattggtgtaaaacattccgatactttcaatgctttcttcacatcagctccatcttacacgtgctcg tgataagtgttcactgctggagaagagtctgttatccacatggggcacaaatagggagaactttggcggtcaagctgtgc cttggatgtaacatatttgctttctttcctagtatacccacagctgttatgtcaggatatgccaccagaatcttcaatgg tgagcatggccaggtgtgctttatgagtgatgccttcaatgggacaaaatggccaacaatttatatcggtctcattgcga ttggatttgctgtgtgcgtatttgtcatttgcttatcgtacattgctttgatacgatttcgttgccaagtacgacacaaa agagattcaacatccaagaaagaaaagaaagacatcggaaaaacaactgcaacgctgattattttaactgtaattttctt agtcagttatatacccttcctgattcttggattgattgctgcgatcgacgaaaacttcagagaaggatggaatgttgcaa cttttgctacatacagaatattcgcacgtttcccacatctgaataatatcctgaacccgttcatttatggatgtaaagat ccacattttaaacacaggctaattcagatgtactcgccgtacattccgaaatgtttttgtccaaaacaagaggagaacca gattgaaatatcaaagtga |
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Protein
| Protein ID | pfu_aug1.0_56422.1_41660.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_56422.1_41660.t1 MTSTSNTTVMANSFKNENATDNVYGIYDPNGLNRIPALIFSTTLLVVGTIGNAHALIINIQRYRERTTRRNNKNPYVVFV LSLAILDLFVCTFVLPLDIIDTCTHFTLLSRDWCKTFRYFQCFLHISSILHVLVISVHCWRRVCYPHGAQIGRTLAVKLC LGCNIFAFFPSIPTAVMSGYATRIFNGEHGQVCFMSDAFNGTKWPTIYIGLIAIGFAVCVFVICLSYIALIRFRCQVRHK RDSTSKKEKKDIGKTTATLIILTVIFLVSYIPFLILGLIAAIDENFREGWNVATFATYRIFARFPHLNNILNPFIYGCKD PHFKHRLIQMYSPYIPKCFCPKQEENQIEISK |
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