Gene
| Gene Model ID | pfu_aug1.0_5646.1_31001 |
|---|---|
| Locus | scaffold5646.1 : 1 ... 25664 : - |
| To GenomeBrowser | scaffold5646.1:1..25664 |
| Genes list of scaffold | scaffold5646.1 |
| Synonym | pfu_aug2.0_803.1_11193 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5646.1_31001.t1 | 4 | 1 | AAA_18 | 22 | 92 | 3.0e-08 | 34.0 | 0.2 | 94.0 | 3.3 |
| pfu_aug1.0_5646.1_31001.t1 | 2 | 1 | DHC_N2 | 267 | 467 | 0.0 | 311.4 | 0.0 | 0.0 | 207.7 |
| pfu_aug1.0_5646.1_31001.t1 | 2 | 2 | DHC_N2 | 476 | 587 | 0.0 | 311.4 | 2.0e-31 | 9.4e-29 | 100.1 |
| pfu_aug1.0_5646.1_31001.t1 | 1 | 1 | AAA_6 | 715 | 945 | 0.0 | 331.6 | 0.0 | 0.0 | 330.3 |
| pfu_aug1.0_5646.1_31001.t1 | 4 | 2 | AAA_18 | 752 | 827 | 3.0e-08 | 34.0 | 0.00047 | 0.22 | 11.8 |
| pfu_aug1.0_5646.1_31001.t1 | 3 | 1 | T2SE | 752 | 773 | 7.6e-07 | 28.2 | 0.9 | 430.0 | -0.5 |
| pfu_aug1.0_5646.1_31001.t1 | 3 | 1 | AAA_5 | 753 | 870 | 1.5e-11 | 44.1 | 0.00044 | 0.21 | 11.3 |
| pfu_aug1.0_5646.1_31001.t1 | 3 | 1 | AAA | 753 | 785 | 3.4e-09 | 36.9 | 0.00032 | 0.15 | 12.2 |
| pfu_aug1.0_5646.1_31001.t1 | 3 | 1 | AAA_22 | 753 | 776 | 1.8e-08 | 34.5 | 0.027 | 13.0 | 5.9 |
| pfu_aug1.0_5646.1_31001.t1 | 4 | 1 | AAA_16 | 753 | 795 | 7.1e-07 | 29.3 | 0.0026 | 1.3 | 9.0 |
| pfu_aug1.0_5646.1_31001.t1 | 3 | 1 | RNA_helicase | 753 | 829 | 3.4e-06 | 27.1 | 0.00029 | 0.14 | 12.3 |
| pfu_aug1.0_5646.1_31001.t1 | 3 | 2 | T2SE | 1005 | 1047 | 7.6e-07 | 28.2 | 0.00034 | 0.16 | 10.8 |
| pfu_aug1.0_5646.1_31001.t1 | 2 | 1 | AAA_7 | 1020 | 1043 | 0.0 | 164.0 | 0.31 | 150.0 | 1.2 |
| pfu_aug1.0_5646.1_31001.t1 | 3 | 2 | AAA_5 | 1029 | 1098 | 1.5e-11 | 44.1 | 0.00026 | 0.13 | 12.0 |
| pfu_aug1.0_5646.1_31001.t1 | 4 | 2 | AAA_16 | 1029 | 1057 | 7.1e-07 | 29.3 | 0.094 | 45.0 | 3.9 |
| pfu_aug1.0_5646.1_31001.t1 | 3 | 2 | AAA | 1030 | 1048 | 3.4e-09 | 36.9 | 0.066 | 31.0 | 4.7 |
| pfu_aug1.0_5646.1_31001.t1 | 3 | 2 | AAA_22 | 1030 | 1083 | 1.8e-08 | 34.5 | 0.0067 | 3.2 | 7.9 |
| pfu_aug1.0_5646.1_31001.t1 | 4 | 3 | AAA_18 | 1030 | 1056 | 3.0e-08 | 34.0 | 0.0036 | 1.7 | 8.9 |
| pfu_aug1.0_5646.1_31001.t1 | 3 | 2 | RNA_helicase | 1030 | 1054 | 3.4e-06 | 27.1 | 0.079 | 38.0 | 4.5 |
| pfu_aug1.0_5646.1_31001.t1 | 2 | 1 | AAA_8 | 1165 | 1221 | 0.0 | 208.4 | 0.63 | 300.0 | 0.1 |
| pfu_aug1.0_5646.1_31001.t1 | 2 | 2 | AAA_7 | 1296 | 1540 | 0.0 | 164.0 | 0.0 | 0.0 | 159.9 |
| pfu_aug1.0_5646.1_31001.t1 | 3 | 3 | T2SE | 1316 | 1355 | 7.6e-07 | 28.2 | 7.0e-05 | 0.034 | 13.0 |
| pfu_aug1.0_5646.1_31001.t1 | 3 | 3 | AAA_22 | 1328 | 1388 | 1.8e-08 | 34.5 | 4.1e-05 | 0.019 | 15.0 |
| pfu_aug1.0_5646.1_31001.t1 | 4 | 3 | AAA_16 | 1330 | 1368 | 7.1e-07 | 29.3 | 0.0023 | 1.1 | 9.1 |
| pfu_aug1.0_5646.1_31001.t1 | 3 | 3 | AAA_5 | 1331 | 1469 | 1.5e-11 | 44.1 | 8.0e-05 | 0.038 | 13.7 |
| pfu_aug1.0_5646.1_31001.t1 | 3 | 3 | AAA | 1331 | 1405 | 3.4e-09 | 36.9 | 1.3e-05 | 0.0064 | 16.7 |
| pfu_aug1.0_5646.1_31001.t1 | 3 | 3 | RNA_helicase | 1332 | 1356 | 3.4e-06 | 27.1 | 0.04 | 19.0 | 5.4 |
| pfu_aug1.0_5646.1_31001.t1 | 4 | 4 | AAA_18 | 1334 | 1359 | 3.0e-08 | 34.0 | 0.046 | 22.0 | 5.3 |
| pfu_aug1.0_5646.1_31001.t1 | 4 | 4 | AAA_16 | 1384 | 1411 | 7.1e-07 | 29.3 | 0.98 | 470.0 | 0.6 |
| pfu_aug1.0_5646.1_31001.t1 | 2 | 2 | AAA_8 | 1540 | 1759 | 0.0 | 208.4 | 0.0 | 0.0 | 205.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5646.1_31001.t1 | gi|345323579|ref|XP_003430723.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_5646.1_31001.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5646.1_31001.t1 tttcatcacccttgctgattatctgattgtgaacacgatgcacgttctggccgtgaactcagtgtcgacgttactgaact atctgtccgagcagcttcaaaacacgcccaccctcgaagaaattaaagccttcgctgatgaagctaagcaggcagctgat gagctagccatcgacccagagaagagagaagaaatgaaagcagagaaagccaaacaggaaaaagaaaacaaggagaaaga gaaagaaaaagtagataagaaagagtcccagaactctgtaactgcagcattcaatgcagcttctaactatgccgacacat tcgagccacacagagaattctacagagaaaatgagagcctagatttggatggcatcaaggcacaggagcacgatgttgcc ttctttgctgaggccttggagagataccacggacagaagagaatggcacaggtgatcaaagagaaacgaccaataggaat gctgcttatagacggcacaaagatgaagagtctgctgaatccttcaccaatcagatgtctcgatgtaattaacgagctgt tgccagtaaaggctagatcagaggtggatagactgattgcagagctacaagatgctcagttcaagctggaggtatcacct accacgacactggaatttgtcaacagcctgaccttcctggatgacattcaagtcaggattgatccacttgagaaagaagc catgattgttaaggacatgtacgagttgatagaggagtatgaggtacccacaccaccagaggactttgccgtctaccagt taccagtaatcacagatctgaggaaccccacactaaagcagagacattgggatgtgatagagcaggtcctagactatcac tttactccggaggatcccatgacgctgggaaaactgacagaaataaatgcctttagaagtgccgaggctctacaggagat atctggacaggctagctccgaggccagcttggaaggaatcctcaaaaaggttgaggactcgtggaaatctacagaattca tggtacttaatcacaaagactcaaaggatgtgtttatcttgggtggaacagacgatattcaacagctccttgacgacagc aatatcaacgtagcaaccattgctagctctcgccatgttggaccaatcaaatcaagggttgatgactggcagaaaaatct ggatctatttggcaaaactctggatgaatggctgaattgtcagaggaactggttgtacttggagagtatattcagtgcac cggacatccagcgacagctaccggccgaggccaaaatgttcatgcaggtggacaagtcatataaagacatcatgagaaag gtcaacaaagtaccactggccatcagagccgctacacagccagtaaccctgattgtaaactctagacattttgaatgatt ctacttcttgtctaatgacgagttactggagatcttggctcagaccaggaatcctctcgccgtacagccacatctcagga aatgttttgatgccattgctaagctggagtttggtgttaatccaccatctggggatgatcccaatgaagctgtacagtac aacaatgacatccttgctatgatttctccagagtctgagaaagtttcccttggcaggggcttgaaggccagagggaatgt ggaggattggctaggaaaggtagaggaggctatgttcgtcaacctgaggaaactggtaaaggcagcgctagctgactacg aacagagaccgcgtaaagaatgggtcgtctaccatgcttcacagattgtgctaacggtgtcacagatgatctggtgtcga gatgtaacggaaattctggaaggtgatggagacagattggaaggaatgagagaatttgagcaaaagaacttcagggatct gaatgagttggctagtatcgtcagaggagaaattcccaaactagctcgtgctaatctatgtgctctgatcactctggatg tacacgccagagacatgataaccggcatggtagaaactaaggttgacaaggttacaagctttgactggcagaaacagctc cgttattactgggacctggagctggataactgtgtagttagaatgtctaactccctgtatatatacgggtacgagtatct aggagcctcccctaggctggtcatcactccacttactgatcgttgttacctgtgtctgatgggagccttacagttagatc tcggtggtgccccagcaggacccgctggtactggaaaaacagaaaccaccaaagatctggccaagtcactagctaaacag tgtgtcgtcttcaactgttctgatggtctggattacaagatgatgggtcgctttttctctggtctggctcagtctggggc ttggtgttgctttgacgagtttaaccgtatagacattgaagtactatccgtcatagcacagcagctcatcactatcagga atgctaaggctgctaaggtttccaagttcatgtttgagggacgtgagatcaagctgataatgacgtgtgctgcattcatc accatgaatccaggttacgctggccgtactgagctgccagacaatctgaaggcacttttcagacccatcagtatgatggt gccagattatggattgattgctgaggtgattttgtactctgagggttttgaatcctcaaaaagcttggccaaaaagatgg tacagatgtacaaattatgtagtgaacagctttcacaacaagatcattatgactttggtatgagagccgtcaaatctgtg ttggtcatggccggagcccttaaacgacaaaatcccgacaagagtgaggacgttgtacttatcagagctcttagagacag taatctgccgaaattcttgaaacaagacgcagctctgttccaagccatcctgcaggatctgttcccaggagtcgagattc cggagcacgattatggccgcttgaaatccgaaatcattaattgccaggaggctcgtaaacttcaggtcgtagagacccag atcaacaaggtcatacagttgttggagaccatggaagtcagacatggagttatgttggtgggacctacaggaggaggcaa aactactgtgtacagtatcctgaaagacacctgtgataacctacacaaggcaggattagacaatcctttctaccagcccg tacatacttacgtacttaaccccaagtccatcaccatggaggagctgtacggaggtgtaaacaaactgaccttggagtgg tcagacggtctgatggccatgaccgtcctgagaggatcaagtttacntccgtacatacacatgttgtttgaggtccaaga tctggccgtggcctcaccagctactgtcagcagatgcggtatggtattcattgatccagaggaattgaaatggcttccgt atgtcaaaacttggttaactagctgggaaaacagactgaaggaagaaacacgggaatatctattagaactgttctccaaa tacgtggaggaagggcttaaatttgtcaacaagaaatgtgccgtaacaatggcccaagtggacatcagtaaggtcacaac tctatgtaagctgctggaatccttgctattctcacgtggcggccctgatctcactcaggatactaataaactcaacccgt tactgtgtaccacattcgtttttgcgttcctgtggtccatcggaggtaacctggttgagacgtactgggattccttcgac acgttctgcagacaacagtttgatgacaatggagatgctaagcttccaaaccaaggagatctatggagttgttacatgga cttcgagaccagaagaatggatctctgggagaaaattgtgccggcatttaaatacgacaaggaagtgccgttctttgaga tgttggtacccacagtagatactgtgcgctttggatacctactggagaaattcctggctgtccgttattctgtactgtac actggtggaacaggtgtaggaaagtctgtgattgcccgaggcttactgaacaccatttctgaaagagcatccttcgtacc agttttcatcaacttctctgcccagaccagcagtaagcgtacccaggagatgatcgagagtaaactggagaaaaagagga agaatataattggagcacccattggcaagagagtcattatctttattgatgatcttaacatgcccaaactggacacatac ggatctcagcctcctattgaactgctcagacaataccaggactttggtggaatgtacgacagagaaaaactcttctggaa agagattcaggatatgacgttagcagcagcctgtgcgccacctggtggtggacgtaatcccacatcagctagattgatac gacactttgccatgttaactatcccaccgccatctgaacacagtctaaagcatatgtttacacaaattctgaatggtttc ctaatggacttccccacgtctgtcagacaatgtgtagagggtatcgtaggagccgccgtagagatatacggacgtatgtc caccgatcttctaccgacaccggcaaaatcgcactacgtcttcaacctacgtgatttacttgcttcccatatctgcggtt atagctgcttccagattgaattaagtagaggttatgattactctgccttccacgatgatctgaaaaaactctacacatct gccggagtacaaaacaaccatacaactttcctcttcactgatactcagattgtggtagaggaattccttgaagatataaa caacatcctgaactctggagaagtaccaaatctgtttgagccagatgaatatgaacagctaatcattggatgtagacctg cagctaaggaagtagggatagctgagggaaacagagatgctatctttgacttctgtatcaatagagtcaggaacaatctt cacatcgtactgtgtatgagtcccgtgggtagcgctttccgtacacggtgtcgtatgttcccgtccctcgttaactgctg tactatcgactggttcacagagtggccaaaggaggccttacttggtgtatcaacgtcattctttgagagtgttgaccttg gagctgatgaactaaaggagaagatttccgagatgtgtgtagagatccatatgagtgtaagcacaatggctgagagattc tatgctgagttaaagaggcgttattacaccacacctaccagctacctagaactgatcaacctctatctctccatgttggg ggataagaccaagcaactgaaacaagctagagacagagtaaagaacggtctagtcaagattctggagacaaatgagcttg tagacaagatgaagaaggagttagtggccttggaacctgaactgaaaaagaaatcagaggacacaaacaacttgatggaa aaattagtcgtagatcaggaacaagctgatactttcctctgctag |
|
Protein
| Protein ID | pfu_aug1.0_5646.1_31001.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5646.1_31001.t1 FITLADYLIVNTMHVLAVNSVSTLLNYLSEQLQNTPTLEEIKAFADEAKQAADELAIDPEKREEMKAEKAKQEKENKEKE KEKVDKKESQNSVTAAFNAASNYADTFEPHREFYRENESLDLDGIKAQEHDVAFFAEALERYHGQKRMAQVIKEKRPIGM LLIDGTKMKSLLNPSPIRCLDVINELLPVKARSEVDRLIAELQDAQFKLEVSPTTTLEFVNSLTFLDDIQVRIDPLEKEA MIVKDMYELIEEYEVPTPPEDFAVYQLPVITDLRNPTLKQRHWDVIEQVLDYHFTPEDPMTLGKLTEINAFRSAEALQEI SGQASSEASLEGILKKVEDSWKSTEFMVLNHKDSKDVFILGGTDDIQQLLDDSNINVATIASSRHVGPIKSRVDDWQKNL DLFGKTLDEWLNCQRNWLYLESIFSAPDIQRQLPAEAKMFMQVDKSYKDIMRKVNKVPLAIRAATQPVTLIVNSRHFEXF YFLSNDELLEILAQTRNPLAVQPHLRKCFDAIAKLEFGVNPPSGDDPNEAVQYNNDILAMISPESEKVSLGRGLKARGNV EDWLGKVEEAMFVNLRKLVKAALADYEQRPRKEWVVYHASQIVLTVSQMIWCRDVTEILEGDGDRLEGMREFEQKNFRDL NELASIVRGEIPKLARANLCALITLDVHARDMITGMVETKVDKVTSFDWQKQLRYYWDLELDNCVVRMSNSLYIYGYEYL GASPRLVITPLTDRCYLCLMGALQLDLGGAPAGPAGTGKTETTKDLAKSLAKQCVVFNCSDGLDYKMMGRFFSGLAQSGA WCCFDEFNRIDIEVLSVIAQQLITIRNAKAAKVSKFMFEGREIKLIMTCAAFITMNPGYAGRTELPDNLKALFRPISMMV PDYGLIAEVILYSEGFESSKSLAKKMVQMYKLCSEQLSQQDHYDFGMRAVKSVLVMAGALKRQNPDKSEDVVLIRALRDS NLPKFLKQDAALFQAILQDLFPGVEIPEHDYGRLKSEIINCQEARKLQVVETQINKVIQLLETMEVRHGVMLVGPTGGGK TTVYSILKDTCDNLHKAGLDNPFYQPVHTYVLNPKSITMEELYGGVNKLTLEWSDGLMAMTVLRGSSLXPYIHMLFEVQD LAVASPATVSRCGMVFIDPEELKWLPYVKTWLTSWENRLKEETREYLLELFSKYVEEGLKFVNKKCAVTMAQVDISKVTT LCKLLESLLFSRGGPDLTQDTNKLNPLLCTTFVFAFLWSIGGNLVETYWDSFDTFCRQQFDDNGDAKLPNQGDLWSCYMD FETRRMDLWEKIVPAFKYDKEVPFFEMLVPTVDTVRFGYLLEKFLAVRYSVLYTGGTGVGKSVIARGLLNTISERASFVP VFINFSAQTSSKRTQEMIESKLEKKRKNIIGAPIGKRVIIFIDDLNMPKLDTYGSQPPIELLRQYQDFGGMYDREKLFWK EIQDMTLAAACAPPGGGRNPTSARLIRHFAMLTIPPPSEHSLKHMFTQILNGFLMDFPTSVRQCVEGIVGAAVEIYGRMS TDLLPTPAKSHYVFNLRDLLASHICGYSCFQIELSRGYDYSAFHDDLKKLYTSAGVQNNHTTFLFTDTQIVVEEFLEDIN NILNSGEVPNLFEPDEYEQLIIGCRPAAKEVGIAEGNRDAIFDFCINRVRNNLHIVLCMSPVGSAFRTRCRMFPSLVNCC TIDWFTEWPKEALLGVSTSFFESVDLGADELKEKISEMCVEIHMSVSTMAERFYAELKRRYYTTPTSYLELINLYLSMLG DKTKQLKQARDRVKNGLVKILETNELVDKMKKELVALEPELKKKSEDTNNLMEKLVVDQEQADTFLC |
|