Gene
| Gene Model ID | pfu_aug1.0_5662.1_23856 |
|---|---|
| Locus | scaffold5662.1 : 16336 ... 22815 : - |
| To GenomeBrowser | scaffold5662.1:16336..22815 |
| Genes list of scaffold | scaffold5662.1 |
| Synonym | pfu_aug2.0_528.1_27507 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5662.1_23856.t1 | 3 | 1 | MFS_1 | 253 | 384 | 5.7e-09 | 35.1 | 5.3e-09 | 3.9e-05 | 22.5 |
| pfu_aug1.0_5662.1_23856.t1 | 3 | 1 | UNC-93 | 263 | 372 | 1.3e-11 | 44.2 | 1.7e-15 | 1.3e-11 | 44.2 |
| pfu_aug1.0_5662.1_23856.t1 | 3 | 2 | UNC-93 | 389 | 423 | 1.3e-11 | 44.2 | 0.28 | 2100.0 | -1.9 |
| pfu_aug1.0_5662.1_23856.t1 | 3 | 2 | MFS_1 | 465 | 651 | 5.7e-09 | 35.1 | 1.9e-08 | 0.00014 | 20.7 |
| pfu_aug1.0_5662.1_23856.t1 | 3 | 3 | UNC-93 | 503 | 538 | 1.3e-11 | 44.2 | 0.012 | 92.0 | 2.4 |
| pfu_aug1.0_5662.1_23856.t1 | 3 | 3 | MFS_1 | 656 | 689 | 5.7e-09 | 35.1 | 0.015 | 110.0 | 1.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5662.1_23856.t1 | gi|242023985|ref|XP_002432411.1| | conserved hypothetical protein [Pediculus humanus corporis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5662.1_23856.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5662.1_23856.t1 atggaggatgagcagcaaattaagatcgtaatctcagagcatgacaacgaacaaacgctgaaagaaacaaaggcaaaatc acaaagttctctgagcatagattctgcctacattgaacaagctgcgttgattatgaacaatgaaaccgaaatgaataacg agtgtgaacaatgcttgaatttgaaagccgatctaaacaaaagtcgagatagtttcgattctgcttatactgactctatt acaagtaatgacagtagaacggccttactgaagaagcaactcgaggatgacactggaaatgacgacgaaaatggaaatga cgaagctccaggaactgacggtttaacggaacatattcttaaagatcatgacgacttaccaatgtcagcaaaaagctcat tttgggacataacagactttggtcatgaaattgaggccaaagctaatcgaccacgaatgaacactcttacgcagttgacc gaaagtgcggcatacattgatgatatgtcatgcccaagtcccggtgtcagaaggttaagaagcgcgtgcaaaaacgctgt tatgaatctcagccaagaaatggtattcaaatcaatgtcagttttagaaatagacaaacaaggaataaaagcgccagatc ctgatatggaagttgaaatcgaagaaatcggtttcatcaataaccacatgagaaatttgatcgttcttagcgtgggaata gctctcacaaacaccgccatagggtcgctgagaaacttgcaaagcagtctgaaccacgatggtggtataggtctctactc cctagccgccagtttcttgtctttcacgattttcagtctactaaccccatttatcgtcctcaaattccgaccaaagagat gtctgatcttcagtttgttcactcagctcgtgtacgtgatcgggaacctgcaacccacatttcttgtgttcatacccgcg tctttcctacagggactcggaaacgccctcctatggaattcgatgagtacctacgtcacctacctcgcacgtgcctcggc actcaaaaataacgagcagaccgtacatgtcgcaagcaagtttttcggcattttcttctttttctatcaattctcggttg tgctagggaatttgatctcatcattagtcctcctgtttggtcaggatatcgtgtctcattctcataaccattctacctca acaatggacgtccaagtatcgtataactcaagttccgtagcgcatgcgcataatatgacgtcatcgatttctagtcacag tgatcaccattttgaactttgtggcgcgaaatactgccactcatacaagcttgatcactcaagcatggatgtcgacgaag acaccaagtacctgctgttgggattatacggcatgtgcatggtatttgccgtggttggttgtgcctatctgctggaccct gtgaagacatacgttgcatcaacctctagctgtggacagattatcactcagatttcctcggtgctgaaatgcatccttga caagaggttcctattgatttgtggacttttgatgtactcaaccatgcagttagcattcgtcacggctgaagtaacaaagg cttttgtcacgtgtcctgtgggaatcttcatggtcggctactgcatgatcgtgtatggtgtatgtggtggaacgacgtca ttcattggtggaagattgacgaaatacatcggaagaattccactcatagttgcagctgccataagtaacctgggtctact tgcttttatggtattttggagaccagactcggatcagatagttgccttcttactcctgatgggagcatggggtctaggcg atggcatatggctctcccaagttaattgtatcatcagcgctattttccctgagaaactggaagaagcatttgcagcctca cgaactctccaaggtttgggtggggctattgtcatggggtatgccacccaactctgcatgataagtaaaatgggtatcct cgctggagcctgcattttcggcactagtatgtacatcgtcgccgaaatgatatcaagacgaaaacaagataacattgatg aggagaaatcactcaccaaagcttga |
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Protein
| Protein ID | pfu_aug1.0_5662.1_23856.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5662.1_23856.t1 MEDEQQIKIVISEHDNEQTLKETKAKSQSSLSIDSAYIEQAALIMNNETEMNNECEQCLNLKADLNKSRDSFDSAYTDSI TSNDSRTALLKKQLEDDTGNDDENGNDEAPGTDGLTEHILKDHDDLPMSAKSSFWDITDFGHEIEAKANRPRMNTLTQLT ESAAYIDDMSCPSPGVRRLRSACKNAVMNLSQEMVFKSMSVLEIDKQGIKAPDPDMEVEIEEIGFINNHMRNLIVLSVGI ALTNTAIGSLRNLQSSLNHDGGIGLYSLAASFLSFTIFSLLTPFIVLKFRPKRCLIFSLFTQLVYVIGNLQPTFLVFIPA SFLQGLGNALLWNSMSTYVTYLARASALKNNEQTVHVASKFFGIFFFFYQFSVVLGNLISSLVLLFGQDIVSHSHNHSTS TMDVQVSYNSSSVAHAHNMTSSISSHSDHHFELCGAKYCHSYKLDHSSMDVDEDTKYLLLGLYGMCMVFAVVGCAYLLDP VKTYVASTSSCGQIITQISSVLKCILDKRFLLICGLLMYSTMQLAFVTAEVTKAFVTCPVGIFMVGYCMIVYGVCGGTTS FIGGRLTKYIGRIPLIVAAAISNLGLLAFMVFWRPDSDQIVAFLLLMGAWGLGDGIWLSQVNCIISAIFPEKLEEAFAAS RTLQGLGGAIVMGYATQLCMISKMGILAGACIFGTSMYIVAEMISRRKQDNIDEEKSLTKA |
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