Gene
| Gene Model ID | pfu_aug1.0_5662.1_23858 |
|---|---|
| Locus | scaffold5662.1 : 46276 ... 50289 : + |
| To GenomeBrowser | scaffold5662.1:46276..50289 |
| Genes list of scaffold | scaffold5662.1 |
| Synonym | pfu_aug2.0_528.1_27509 |
Manual annotation
| Study field | Transcription Factors |
|---|---|
| Gene name | fork head box protein F-like |
| Description | Reciprocal BLASTP best hit to NCBI Accession CBI70345.1, fork head box protein F (Patella vulgata). |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5662.1_23858.t1 | 1 | 1 | Fork_head | 71 | 163 | 3.9e-38 | 129.3 | 5.4006e-42 | 8.0e-38 | 128.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5662.1_23858.t1 | gi|274133304|emb|CBI70345.1| | forkhead box F protein [Patella vulgata] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_5662.1_23858.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5662.1_23858.t1 atgactaccgagttagagctattgcaggatgttgaaaggaaagttgttccaaaatctgagccaggattttctgatgaaag tgcagcatcagacgatgatgacgaggaatcagccgaggactcgcagacgacacctcagccaaatccggaatcgccaacaa caggacagaaaaatccaaagaaatctggagttggtgtgagaaggcaggagaagccaccctattcttatattgccctcatc gtcatggcaattcaggctacacccaacaaaagatgcaccctcagtgaaatttatcagtttctgcagcagagatttccgtt tttccggggatcgtaccaaggatggaagaactcagtgcggcacaacctctccttaaacgagtgctttattaaattaccaa aaggacttggaaggccgggaaaaggacactattggaccattgatccggctgcagaattcatgttcgaggagggatctttc cgcagacgaccgcgtggtttccggcggaaatgtcaggcattaaagcccttcggaatgctcgggatcaatggtatgggaag tggacagtcgatgatcggatctcattatgacttgttccaaaatacaaatatgtcgtctatgaatatgcagtgctccggga acaccacacaaacctacgacaacacgggaatgatgcagcagaactcaaccctccaccactctaacttttcaccgatgcct caacacaatcagaatttgaattgcagttttaacatgacaatgaatggtcgatatggaccaagctgtgctttatcaggact agagggtgactacgtacagtcccccgcaccaaacactttacctgtgtacgatagagaccattattggtccgctcaaagat actcaaatatgacaaaacaacagacattgagtccggcagggagtacgggatcgattccgagcatttcaccagcaagttcc ggcgaccactctccttacgggtccaatattgtgacgacctcagaaccaatggacttagctttagctggtgggtacacttt ttaa |
|
Protein
| Protein ID | pfu_aug1.0_5662.1_23858.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5662.1_23858.t1 MTTELELLQDVERKVVPKSEPGFSDESAASDDDDEESAEDSQTTPQPNPESPTTGQKNPKKSGVGVRRQEKPPYSYIALI VMAIQATPNKRCTLSEIYQFLQQRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPAAEFMFEEGSF RRRPRGFRRKCQALKPFGMLGINGMGSGQSMIGSHYDLFQNTNMSSMNMQCSGNTTQTYDNTGMMQQNSTLHHSNFSPMP QHNQNLNCSFNMTMNGRYGPSCALSGLEGDYVQSPAPNTLPVYDRDHYWSAQRYSNMTKQQTLSPAGSTGSIPSISPASS GDHSPYGSNIVTTSEPMDLALAGGYTF |
|