Gene
| Gene Model ID | pfu_aug1.0_5668.1_31018 |
|---|---|
| Locus | scaffold5668.1 : 93429 ... 106955 : - |
| To GenomeBrowser | scaffold5668.1:93429..106955 |
| Genes list of scaffold | scaffold5668.1 |
| Synonym | pfu_aug2.0_64.1_13522 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | TEF1 like |
| Description | BLASTP best hit to NCBI Accession XP_001601555 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5668.1_31018.t1 | 2 | 1 | TEA | 21 | 115 | 0.0 | 439.1 | 0.0 | 0.0 | 176.5 |
| pfu_aug1.0_5668.1_31018.t1 | 2 | 2 | TEA | 113 | 277 | 0.0 | 439.1 | 0.0 | 0.0 | 266.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5668.1_31018.t1 | gi|148690876|gb|EDL22823.1| | TEA domain family member 2, isoform CRA_c [Mus musculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_5668.1_31018.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5668.1_31018.t1 atgtcttccacctggacaaatccagataacctgggtccggacacactgaagggggaccctgaaagtccagaaaataacaa taatgacgacctgtctaacgatgctgagggcgtgtggagtcccgacatcgaacagagcttccaagaggcacttgccatat atcctccttgtgggaggaggaaaattatcctgtctgacgagggcaaaatgtatggtagaaatgaattgatagcgagatac atcaaactccgaacaggaaaaagtcgctctagaaagcaagtttctagtcatattcaagtattggctcgtcgtaaatccaa agaaattcaagcgcagctcaaggccatcgatattcggcaaatttacgataaatttcctgagaagaaaggaggattaaaag agttgtacgataaaggacctcaatcagctttcttccttgtaaaattctgggcagatattaacactaatgttcaagatgaa gctggggcattttacggtgttacaagccaatacgagagtacggagaatatgactatcacctgctccaccaaagtgtgttc atttggtaaacaagtcgtggaaaaagtagagacggagtatccacgttttgagaacggacgatacgtatacagaatacatc gatcacccatgtgtgaatatatgatcaactttatccacaaacttaaacatctacctgaaaagtatatgatgaacagtgta ttggaaaacttcacaattctacaggtggtgagtaacagagacacgcaagagacattactttgtgttgcgtatgtgtttga agtatcaacgagcgagcatggagcacaacatcacatctatcgtttagtgaaggactag |
|
Protein
| Protein ID | pfu_aug1.0_5668.1_31018.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5668.1_31018.t1 MSSTWTNPDNLGPDTLKGDPESPENNNNDDLSNDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARY IKLRTGKSRSRKQVSSHIQVLARRKSKEIQAQLKAIDIRQIYDKFPEKKGGLKELYDKGPQSAFFLVKFWADINTNVQDE AGAFYGVTSQYESTENMTITCSTKVCSFGKQVVEKVETEYPRFENGRYVYRIHRSPMCEYMINFIHKLKHLPEKYMMNSV LENFTILQVVSNRDTQETLLCVAYVFEVSTSEHGAQHHIYRLVKD |
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