Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_56717.1_48860
Locus scaffold56717.1 : 1 ... 4076 : -
To GenomeBrowser scaffold56717.1:1..4076
Genes list of scaffold scaffold56717.1
Synonym pfu_aug2.0_2908.1_28980

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_56717.1_48860.t1 gi|194763060|ref|XP_001963652.1| GF19983 [Drosophila ananassae] 4.0e-29

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
8-16cell 1
egg-Dshape 1
trochophore 1
>Adult tissues
Dshape 1
adductorMuscle 1
maleGonad 1
mantle 1

Transcript
Transcript IDpfu_aug1.0_56717.1_48860.t1
Definition-
>pfu_aug1.0_56717.1_48860.t1
ggctctctttggccattgacgtttggattagcatgctgtgctgtagaaatgatgcattttgccgctcctcgttatgatat
ggatcgctttggtgtggtatttcgagctaccccacgtcatgctgatgttattattgtagcaggaactctcacaaataaaa
tggccccagctttacggaaggtacatgatcaaatctaa

Protein
Protein IDpfu_aug1.0_56717.1_48860.t1
Definition-
>pfu_aug1.0_56717.1_48860.t1
GSLWPLTFGLACCAVEMMHFAAPRYDMDRFGVVFRATPRHADVIIVAGTLTNKMAPALRKVHDQI

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