Gene
| Gene Model ID | pfu_aug1.0_5690.1_67298 |
|---|---|
| Locus | scaffold5690.1 : 548 ... 26729 : + |
| To GenomeBrowser | scaffold5690.1:548..26729 |
| Genes list of scaffold | scaffold5690.1 |
| Synonym | pfu_aug2.0_2490.1_02149 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5690.1_67298.t1 | 2 | 1 | SBP_bac_3 | 149 | 177 | 7.5e-18 | 64.5 | 0.19 | 710.0 | -0.8 |
| pfu_aug1.0_5690.1_67298.t1 | 1 | 1 | ANF_receptor | 187 | 518 | 3.3e-40 | 137.9 | 1.30321e-43 | 4.7e-40 | 137.4 |
| pfu_aug1.0_5690.1_67298.t1 | 2 | 2 | SBP_bac_3 | 563 | 867 | 7.5e-18 | 64.5 | 2.3e-20 | 8.7e-17 | 61.1 |
| pfu_aug1.0_5690.1_67298.t1 | 1 | 1 | Lig_chan-Glu_bd | 572 | 633 | 1.1e-12 | 47.7 | 7.1e-16 | 2.6e-12 | 46.5 |
| pfu_aug1.0_5690.1_67298.t1 | 1 | 1 | Lig_chan | 687 | 902 | 2.5e-26 | 92.1 | 1.3e-29 | 4.7e-26 | 91.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5690.1_67298.t1 | gi|328705159|ref|XP_001942991.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5690.1_67298.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5690.1_67298.t1 atgaaagaaaacaaggaaatagacggtatgacgccgtatggttgctcatgcgctgttcgatgttgccctgacgccttcag tcctcggagaatcaccaacattttccacatgccaaatatttatagcatcggctgttgtggctgcatattctgtccatctg ttctcaatgccaatcaaatgggaccaccaatatttctgacaatggtcatgccagtagctccaagacaaatggaaatgcct gaaccaccggaaatgcctgaaccagctgaattgcctgaaccaccagaaatgccagaaccactcgaaccagcagagggtcc ggaatttcccgaaccagcagaattcccagaaatgtctgaacctgtccagatcgagcagcctgaaattgagcttaagagcc aaggcccgcccgaaattgaaccatctgaactaagtgcaccggaaggccgagaaattgaattgaaagcgggattcttttac aaagacgacacggacttgctgagggctttccaatggacattcacaaagttaaatgttagaaccggatacgatatatgtaa tgtccggatcggtggtgccgaatgttatgtaccaagtacatccaaaatacgctttaaagacagcttcgaagtttcaaaga aagtctgccaggaagtggaagccggaagtaaagtcctgtttggacccaacatccggtcgtccagtggcatagtcaattcg attgcaagctctttaagcattccacatattcaatttcattgggagccacatgatatagctacagacacacacggcccacg tagaattcccatgacaataaacgtctatccacattacctgaagttggcggaggcccacgccgacctgatccgacactggc agtggaacaagtttacagttatttaccaggacaatgacagtttgatacgattacaaaaagtactgcaactatccagtgag aaaggtatgaacgtcacaatacgcaaaatggacaaaaacccaaacaaccattccaaactgttgaaggaaataggacttag ggtggaaaccaggattgtggtcgactgtagcatcaacgaaatagaacatttcttacagacggctaaagataaaagggttt tggacgagtaccgccattttcacttcacaacgctggacctatctctggtgaacatggaacctttcatagactccggtgcc aatatcacagctttcagaataattaatcctgatagtaaactcgtgactcaaaacatggcagattggaggaaacaatacat cattgattctcaaggaactaaaactgttagtacaaagctggcgatgctccacgacgctgtacatttactggatatagcca ccatacactacattgataagttaggacgtcttgattacagtacaccactcagctgtagcaaaactgacacgtggtctcaa ggaacaagcttcatgaactaccttaagacagttgtattctatgggatgacaggtcaagttcagtttaacaactatggtgt cagagacaacttcacaatggaaatcattacgccaattcatcataatgggacaataaagataggagaatggcattctttaa agttaccaaatgaaaccgggattctaataacaagatcagaggaggaaatccgaaacgatacacttgaaaaactaaagcac aaaacactacgggtggtaacaaaaactgatgacccttatgtatttaacaaggagagaaaccctgatggtagcattaaata cacgggctttgccatagatatcttggatagagtagcagagagtctgaacttttcatacgagatttatatggatgcacccg ggtatgggaactgtgcctcaccaggccactgtgatggtatggtgaaggaacttgtcaatcatagtgctgatctggcggtg gctgggatgaccataacatacgacagagagaagtacnggttcctgtttgttcctgatttgtatgccttcgatttccgatt ttatgaattatcgattttgtgctgtatacaaggatatggtcattatccatatttgtcattttttccaggtagtgatttgt cccctggtgcttcctccacaaggatagttgctatctgttggtggttctttaccatgataatggtgtcatcctatactgcc aacctcgcagccttcctcaccatgaaaggactagagacaagcatcaaaaagatagatgatctccccaaacagtctgatat caagtatggtacgctggcaaagggaagtactaatgacttctttcggttttcacgggatgtatccacaacataccagaacg tatggaatgttatgcaaggatcccctactgtcttagtaaacaatagtaaattggggatccagaaggttttgaatgaaaac tacgctttcttcgctgaatccacaacaatagactatgtggttcagagggaatgtaagcttactcaagtaggaggctggtt aaactccataggctatggtatagccttaccagaagattccccatatagagatgaaatatcacaagagatactacgtctta gagaggaacaagtcatagacgagctctacaactattggtggaaagaaaaagatggcggcggaaattgtattaaagaaaag gaggaggataaaggctcgctaagatttgagaatgtagctggagtgtttgtagtactactgatgggctcagtggcgggaat attttttgctttattagaattctgttggacatcgcgaaaattcgcaaagaaaaatcagcaatccacgtgtagcgagatga aggataggatacagtttataatgcctttgataggatcatgtaactccaagaggtaa |
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Protein
| Protein ID | pfu_aug1.0_5690.1_67298.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5690.1_67298.t1 MKENKEIDGMTPYGCSCAVRCCPDAFSPRRITNIFHMPNIYSIGCCGCIFCPSVLNANQMGPPIFLTMVMPVAPRQMEMP EPPEMPEPAELPEPPEMPEPLEPAEGPEFPEPAEFPEMSEPVQIEQPEIELKSQGPPEIEPSELSAPEGREIELKAGFFY KDDTDLLRAFQWTFTKLNVRTGYDICNVRIGGAECYVPSTSKIRFKDSFEVSKKVCQEVEAGSKVLFGPNIRSSSGIVNS IASSLSIPHIQFHWEPHDIATDTHGPRRIPMTINVYPHYLKLAEAHADLIRHWQWNKFTVIYQDNDSLIRLQKVLQLSSE KGMNVTIRKMDKNPNNHSKLLKEIGLRVETRIVVDCSINEIEHFLQTAKDKRVLDEYRHFHFTTLDLSLVNMEPFIDSGA NITAFRIINPDSKLVTQNMADWRKQYIIDSQGTKTVSTKLAMLHDAVHLLDIATIHYIDKLGRLDYSTPLSCSKTDTWSQ GTSFMNYLKTVVFYGMTGQVQFNNYGVRDNFTMEIITPIHHNGTIKIGEWHSLKLPNETGILITRSEEEIRNDTLEKLKH KTLRVVTKTDDPYVFNKERNPDGSIKYTGFAIDILDRVAESLNFSYEIYMDAPGYGNCASPGHCDGMVKELVNHSADLAV AGMTITYDREKYXFLFVPDLYAFDFRFYELSILCCIQGYGHYPYLSFFPGSDLSPGASSTRIVAICWWFFTMIMVSSYTA NLAAFLTMKGLETSIKKIDDLPKQSDIKYGTLAKGSTNDFFRFSRDVSTTYQNVWNVMQGSPTVLVNNSKLGIQKVLNEN YAFFAESTTIDYVVQRECKLTQVGGWLNSIGYGIALPEDSPYRDEISQEILRLREEQVIDELYNYWWKEKDGGGNCIKEK EEDKGSLRFENVAGVFVVLLMGSVAGIFFALLEFCWTSRKFAKKNQQSTCSEMKDRIQFIMPLIGSCNSKR |
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