Gene
| Gene Model ID | pfu_aug1.0_5699.1_16736 |
|---|---|
| Locus | scaffold5699.1 : 13712 ... 33405 : - |
| To GenomeBrowser | scaffold5699.1:13712..33405 |
| Genes list of scaffold | scaffold5699.1 |
| Synonym | pfu_aug2.0_3074.1_15706 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5699.1_16736.t1 | 1 | 1 | Pkinase | 2 | 100 | 4.4e-22 | 78.4 | 1.3e-25 | 6.4e-22 | 77.9 |
| pfu_aug1.0_5699.1_16736.t1 | 1 | 1 | Pkinase_Tyr | 10 | 96 | 2.7e-06 | 26.6 | 9.4e-10 | 4.7e-06 | 25.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5699.1_16736.t1 | gi|348573879|ref|XP_003472718.1| | PREDICTED: serine/threonine-protein kinase SIK3 [Cavia porcellus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_5699.1_16736.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5699.1_16736.t1 atgttaaagacgtggtgtggatctccgccctacgccgccccagaactgtttgagggtaaagaatacgcagctcctggtgt cgatatatggagtcttggtgtagtcctatatgtattagtttgtggtgctctgccgtttgacggaagtacgttaatgagtt tgagaggacgagttcttggcgggaaatttagagttccattttacatgtctacagagtgtgagaaccttatcaagcagatg ttaacggtggatcctgcaaaacgaataacgattgatcaaatcctgaatcatcggtggatgaagcagggcgaggaggatcc agaatttgaggagatgttgtacgaatataaccgtccgagcgacgtggatccagacgtagagaatctcaacgagttaatac tgtcacatatcgagtcgttaagactggacagggataaagccgaggagtcagtacggaatcaagcgcacgatcaccatagt gctgtttatcatctattattagacaaactccgtaaacactcagtaaaaacaagtgtaggaaaagttcaaagcatgtgtat accaaatattcctatagccatgaaaacagagaggaggtctagcatcacgacaggtgtggtggagagaaaagaagttgaga ccaagccggctatcccatcatcccttggggcacctgtcattcctcatgtacagttctacgatgagaataatcaactcact gagcctgatcactcagatcaaggggaggagaccagcagccagcactcagactccgacagtgaagaaccgtctccggaggc cctggcccggtacctagccatgcggcgacataccgtaggtgtcggtgacagtaggcatgagtcacctatgtccccccagg gtctgcccctcccgacacccccgttacagggatcagtaacggtggaggagaacgaggatgggggatcggatcaggaacca gatcctgacgcagttcaaagaagcaggtcagcacacgtgatccaagtaaagaggcggagcttcaacagcaacacacttta cacagacttcatcaatcatttcaattag |
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Protein
| Protein ID | pfu_aug1.0_5699.1_16736.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5699.1_16736.t1 MLKTWCGSPPYAAPELFEGKEYAAPGVDIWSLGVVLYVLVCGALPFDGSTLMSLRGRVLGGKFRVPFYMSTECENLIKQM LTVDPAKRITIDQILNHRWMKQGEEDPEFEEMLYEYNRPSDVDPDVENLNELILSHIESLRLDRDKAEESVRNQAHDHHS AVYHLLLDKLRKHSVKTSVGKVQSMCIPNIPIAMKTERRSSITTGVVERKEVETKPAIPSSLGAPVIPHVQFYDENNQLT EPDHSDQGEETSSQHSDSDSEEPSPEALARYLAMRRHTVGVGDSRHESPMSPQGLPLPTPPLQGSVTVEENEDGGSDQEP DPDAVQRSRSAHVIQVKRRSFNSNTLYTDFINHFN |
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