Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5704.1_67303
Locus scaffold5704.1 : 34686 ... 41125 : +
To GenomeBrowser scaffold5704.1:34686..41125
Genes list of scaffold scaffold5704.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_5704.1_67303.t1 gi|198434843|ref|XP_002122926.1| PREDICTED: sodium-dependent glucose transporter 1-like [Ciona intestinalis] 6.0e-16

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_5704.1_67303.t1
Definition-
>pfu_aug1.0_5704.1_67303.t1
atggataaggcctatacgaccgacgtcaaaagtcacgcaagtcgggatgaaaggaaaagcttccgaaatagcaaattgat
ttctgatgtcatggtatgtgtgagttttaacttctacggcacaggcggtactgcacttctgtcgcgcacctggggtaatg
acggacggatgttcatgcaggctctacattttggtcattcctttggaggcgctttgtctccattggccatagcacctttt
cttatccccgaaccggagacaacattaaatcatacagtttcactagctgagcagaacattagcacaagcttttcaaacga
tacagcatttaatgaaacagtttctcgatggcgttactcaggaaacaactcactcattgatgccgatcctaaggattcta
tattgtatgtaggattttcaatatcagccgccgttgctttactttgttctatccctatattctttagtttgatacaagtg
cacaatgcgataaaacgagtaaaaaggatggaatccgcaaaggatgagaaattaacggaaagagatgaccgccgaaaaga
gaacatgactcagaaactaaaagtgttcgtggtgttgatattattatccgtatttgtggtagactgtgccatagaagaca
cattcacggcattcttatcaacattttgtgtacggcagctaaactggaccaaagttaacggtgccatgattacctctgca
ttttgggcagcttatgccgccggtagattcgccggtattatactgatagtgattttttcgccacgttctctcatactctt
ccatgccactctagaactgatctctttcggtggtatttttgcatcagcttggtttgacgttcacactggaatatggatat
gtgctccaatttccgggtacgccatgtccatcctatttccaagtatgtttacatggacggaggaatcctttctaccggtc
actggtttcatggcatccctgttcttggtcggtgctacagcgggttcgtcagtcaatcctcttattcttggccagataat
ggagaagtacacagatatgtggtatgtttaccttttgacgggggaagctattttattctatatgatcatcatatgtgtat
ttatcttatcaagagtcataggaaaaccaaacagagaattccaagatagtgaaatcgaaattcgacatttgggtgatagg
aatagttag

Protein
Protein IDpfu_aug1.0_5704.1_67303.t1
Definition-
>pfu_aug1.0_5704.1_67303.t1
MDKAYTTDVKSHASRDERKSFRNSKLISDVMVCVSFNFYGTGGTALLSRTWGNDGRMFMQALHFGHSFGGALSPLAIAPF
LIPEPETTLNHTVSLAEQNISTSFSNDTAFNETVSRWRYSGNNSLIDADPKDSILYVGFSISAAVALLCSIPIFFSLIQV
HNAIKRVKRMESAKDEKLTERDDRRKENMTQKLKVFVVLILLSVFVVDCAIEDTFTAFLSTFCVRQLNWTKVNGAMITSA
FWAAYAAGRFAGIILIVIFSPRSLILFHATLELISFGGIFASAWFDVHTGIWICAPISGYAMSILFPSMFTWTEESFLPV
TGFMASLFLVGATAGSSVNPLILGQIMEKYTDMWYVYLLTGEAILFYMIIICVFILSRVIGKPNREFQDSEIEIRHLGDR
NS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495