Gene
| Gene Model ID | pfu_aug1.0_57137.1_20224 |
|---|---|
| Locus | scaffold57137.1 : 1 ... 3886 : + |
| To GenomeBrowser | scaffold57137.1:1..3886 |
| Genes list of scaffold | scaffold57137.1 |
| Synonym | pfu_aug2.0_1979.1_31991 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_57137.1_20224.t1 | 1 | 1 | NACHT | 19 | 162 | 6.0e-12 | 45.5 | 4.5e-15 | 1.1e-11 | 44.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_57137.1_20224.t1 | gi|260814662|ref|XP_002602033.1| | hypothetical protein BRAFLDRAFT_82622 [Branchiostoma floridae] | 4.0e-20 |
Transcript
| Transcript ID | pfu_aug1.0_57137.1_20224.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_57137.1_20224.t1 gcgaaaaattcatttgagtgaatttttgccatctaattcccatggaaaaggacagaggataatcctggagggatcaagcg gaagtggtaaaaccatactgctccacgtggtggcttacctgtgggcaacacagcggaaatacttcaagaaccattatcct cttctcatccatttcaacttacaagaactcgacggaaagtttgaggacgccatctgcaggaaattactgcccgatagttt cagacttaatcctgcagaattcttttccttgctggaagccaattcgcgagatgttgtcatgttgattgacggatacgatg gagggctaggtcatgaggaactggaggatatcctccttggtgagagacttcgccaagctacagtcattgttgcaatgaat ccagaggttgtttccaatccgggatttacaccagattctaggtactttaatttaggatttagcaggaacaatgtcacacg gttcatgaaaacttgcatgtaccacttcaaattcaaccctgaacaccacgagcgcttattcgattcaatcaatgacacat catggaaattgtatccaaatttgacactacctctgacatctctcctggtttttgccatctaccagtcttcaaagaaatca aatgtactggatatctcgggtacaacatcattacttgaagcatacggctttgcgatggccacacaattttgcaaacgaca gaagttggacataataggtctagaatttccagaggaggttgtacgtgcgatcgatcagctgagttcattcgcttacaaca atcttatggaagacgaacggatgttcactatacaagaaataacaatggacgctcaaaatgccataattctcaaacttgga gcattcctgaaattgacgccgaaatcaaaatggaatttgacttgcactttgatgcatgatttccttgcagcccggtatat atccgacttcgttctagatgagatgattacgattataaaggaccaccgcattgtcaaacaatccaagtataactacctcg ttatgctgctttgtggactgtacagaaacgactatgacacgaaaagaagacagggccccgaccacctctctgaatgtcag tcggacttctcggctgataacatgcctgagttcgctacagccggcagagcacggactgacttacgcccccccccccttta ccatctatttacatatgtaaaacatatcctcccccttctccaccaccaccaccaccaccgccgccgcagcagcagcatag gcagcatcatcaacagcagcatcaatgtttcaatatcgaatcgatttcttacccgcctgcttgatattgaaacattgctg ctgctgctgctgcggcggtggcggtga |
|
Protein
| Protein ID | pfu_aug1.0_57137.1_20224.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_57137.1_20224.t1 RKIHLSEFLPSNSHGKGQRIILEGSSGSGKTILLHVVAYLWATQRKYFKNHYPLLIHFNLQELDGKFEDAICRKLLPDSF RLNPAEFFSLLEANSRDVVMLIDGYDGGLGHEELEDILLGERLRQATVIVAMNPEVVSNPGFTPDSRYFNLGFSRNNVTR FMKTCMYHFKFNPEHHERLFDSINDTSWKLYPNLTLPLTSLLVFAIYQSSKKSNVLDISGTTSLLEAYGFAMATQFCKRQ KLDIIGLEFPEEVVRAIDQLSSFAYNNLMEDERMFTIQEITMDAQNAIILKLGAFLKLTPKSKWNLTCTLMHDFLAARYI SDFVLDEMITIIKDHRIVKQSKYNYLVMLLCGLYRNDYDTKRRQGPDHLSECQSDFSADNMPEFATAGRARTDLRPPPLY HLFTYVKHILPLLHHHHHHRRRSSSIGSIINSSINVSISNRFLTRLLDIETLLLLLLRRWR |
|