Gene
| Gene Model ID | pfu_aug1.0_5714.1_23879 |
|---|---|
| Locus | scaffold5714.1 : 1 ... 42545 : + |
| To GenomeBrowser | scaffold5714.1:1..42545 |
| Genes list of scaffold | scaffold5714.1 |
| Synonym | pfu_aug2.0_310.1_00581 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5714.1_23879.t1 | 24 | 1 | Cadherin | 34 | 64 | 0.0 | 667.9 | 1.4e-05 | 0.21 | 11.8 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 2 | Cadherin | 96 | 184 | 0.0 | 667.9 | 2.6e-14 | 3.9e-10 | 39.8 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 3 | Cadherin | 198 | 291 | 0.0 | 667.9 | 2.3e-16 | 3.4e-12 | 46.4 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 4 | Cadherin | 305 | 398 | 0.0 | 667.9 | 1.0e-15 | 1.5e-11 | 44.3 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 5 | Cadherin | 412 | 499 | 0.0 | 667.9 | 9.3e-11 | 1.4e-06 | 28.4 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 6 | Cadherin | 566 | 628 | 0.0 | 667.9 | 1.3e-08 | 0.0002 | 21.5 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 7 | Cadherin | 643 | 732 | 0.0 | 667.9 | 3.3e-12 | 4.9e-08 | 33.1 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 8 | Cadherin | 747 | 836 | 0.0 | 667.9 | 2.2e-15 | 3.2e-11 | 43.3 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 9 | Cadherin | 858 | 942 | 0.0 | 667.9 | 2.9e-11 | 4.3e-07 | 30.0 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 10 | Cadherin | 957 | 1049 | 0.0 | 667.9 | 1.6e-11 | 2.4e-07 | 30.9 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 11 | Cadherin | 1075 | 1103 | 0.0 | 667.9 | 0.055 | 810.0 | 0.3 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 12 | Cadherin | 1127 | 1216 | 0.0 | 667.9 | 5.5e-13 | 8.2e-09 | 35.6 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 13 | Cadherin | 1230 | 1318 | 0.0 | 667.9 | 2.1e-11 | 3.1e-07 | 30.5 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 14 | Cadherin | 1330 | 1390 | 0.0 | 667.9 | 5.3e-09 | 7.9e-05 | 22.8 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 15 | Cadherin | 1400 | 1464 | 0.0 | 667.9 | 3.1e-06 | 0.045 | 13.9 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 16 | Cadherin | 1476 | 1571 | 0.0 | 667.9 | 1.1e-08 | 0.00016 | 21.8 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 17 | Cadherin | 1587 | 1673 | 0.0 | 667.9 | 2.3e-10 | 3.4e-06 | 27.2 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 18 | Cadherin | 1690 | 1781 | 0.0 | 667.9 | 1.5e-13 | 2.2e-09 | 37.4 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 19 | Cadherin | 1793 | 1883 | 0.0 | 667.9 | 1.5e-10 | 2.2e-06 | 27.8 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 20 | Cadherin | 1899 | 1993 | 0.0 | 667.9 | 1.1e-20 | 1.6e-16 | 60.2 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 21 | Cadherin | 2007 | 2097 | 0.0 | 667.9 | 2.3e-17 | 3.4e-13 | 49.6 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 22 | Cadherin | 2113 | 2213 | 0.0 | 667.9 | 5.4e-10 | 8.0e-06 | 26.0 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 23 | Cadherin | 2227 | 2322 | 0.0 | 667.9 | 1.1e-07 | 0.0016 | 18.6 |
| pfu_aug1.0_5714.1_23879.t1 | 24 | 24 | Cadherin | 2346 | 2424 | 0.0 | 667.9 | 1.8e-08 | 0.00027 | 21.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 2 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5714.1_23879.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5714.1_23879.t1 ttcactgttattgcacaagatattggacggagaactggctcggcctccgtaattatcgatgtcgtgagagacgcagatcc tgttttcaggaacactccttacaatacacaaatttccgaaaggtcccccgtcggtcaatctatatacaccattacagcaa ctgactccgatctgaagctgcgcgtgcaagcctacgatccacagtaccccacggatagagctgaagaaactgtcaccatc accataacaagaaacgagaatcctcctgtctacaaccagctgtcgtataatgccaatatcagcgagactacggcaatagg cgtatcggtgctacgtgtgaacgctacagacagggacggggatcgtgtcacttatacaagagtggggacctctgtagcag atacctatttcgtgctggatgggtcgtcggggatcatcagtgttcgtgcagatctaacccaggaccaaggaactacttat acgatggtaatcagagcaagtgacaatggcaacccagtaaagactacagatatttccgtatttatatcggtgtttaggga caccagtagaccagtgttcggcattcccaattaccaaagaacagtaaatgagaatgtccccataggaacctcacttataa ccgtacaagctacagatgctgatttagtgggtcaaatccgatatgataaagacggaatatatccagctccaagcctcttt aatattgatcctatattgggaaatattagcgtagcaaggaatcttcgaagtgataccattcgtacaacttcagtttataa tctacgagtgattgcttacgacacatttagacctgatgctcgtggaacagctacggttcaaataacggttctgcgtaatc catcgaccccacaatggtctctgccaacttttagtacgaccataagagaggaccatcctgtactgtcgggtgtaatcaac gtcactgctacggatgccgatcctacggatcaaatcacctatgccattttgaacgaggtagaggaaaggactctgacgaa caaccatacgttctacataaatgccgatactggactgatctcactaggaaagagtattctgggcacgcaagtccaaagat ttatcctgactgtacaagcctgcgacaacggagttcctcagaggtgtgctaacactaccgtcaccatatcgattgatcaa aacaagaatgcccctgcattcgccaacacgccatataccagaaccataaatgaagttacacctgtcacgtcacaagtgtt ggtcattacagccaatgatgcatcacttaggggtgctctgcaattcgagatccttccacccggtacagattacttcacac ttgatgcattctccggaaatttgacgctagctaaggatctacgaacaagtctggaatcgtcctattctttcaaagtggtg acttatgactctggagagccgcagtatcgagccactgcagatgttaccgtcatcattatccgtaatttgaatggaccagt tttcctgacagacccatatgtagtggccgctctggatcagaatactaactttggatcaactgttattaacactacagcta ctgatttagatgggttaaaaatagcatcaaaagtagtgatgtcgggtcttggagtgtctaaattgcaagtctaccgtaat atgaagaaggatactctccgttatttcatcggaggaaatgcaacagtgaaggcctactttgacgttaatcctgacaatgg tgtgatcttcctgcgacagttgctgagcagcccaccagtcggattcttttcgttcccagtgtatgccagagatcagcgag ttgtgaatgagaaaacaggtacagccactgtacaaatcaccatcgattttgatgaaaacccccgtttcttggacccatct tacaatcagcagttactagagtcacatgccgtcaacagcttcgttatccaaacaagggcagaagaccccgatctgaaggg aactctggtgtatgagtctattggtctgttccctgcagaagcattctttgccgtaaataggacgaatggagtcgttacat taacgcgagacctgcgtgaggattctgctaatctccagtcatacactctaagggtagtagcatatgattcggtgatacca aataaccgagccacaaccgatgtcgttataacggtcatccgtaaccctgcagctcctgtgttccaaccaaatgccgacta cagcacagtaattactgagaatgccaccttgggatcttcagtgatcgatataaatgcagtggatcaggacggggatactg tgacatatgagttggtagcgtccagtccagctgacggcggagatttcttcttcttgaacagagacgatggaatgataacc gtaaaacgacccttaacagaaacatccaactcattctatcagttgaccattcaagcaagagatgggcgtggtcaggcagc caatgctacagccagaataactataacaagacttccagccaaccagcctccattttatgtcaatcggccgtacaacgtaa ccatacgcttcgatcacggtatcggaagctctgtccttcaaatcttggcccaagatagtgaccttcagggtgcgattgtg tatgaaatactcggaatttaccctggccctgacttcttcggtatcaacagtacaaatggattaattacactgaaacagag tttgaataatgatgttctacagacgttacagtatacgctgcgactgtcggtatatgacagtgcgcaaccggcacaaaaag tggaaaccaatgctatcataaacgttatacgtaatcccaccagtcccatctatgtacagcctactggatactcggtgacc atcaacgagaaattctctgttggtggattggtgctccgtgtaaatgcaactgactcggacggggacacagttttgtacaa tatgttgatggacacacaaggacttactgcttcagaattcttctttgtcaatggagccgatggcggcatttacgtgatta aagatctaactaccacaaataccaatgccttcagtttccaaatacgtgctcgggatcaaggaataccagagagatatgct tttgtctccgtcttaataaacattgaaagagacaactttgatccaggattcggactaagcaactacttcgttcaagtttt ggaaacggaacctgtgaataatcctcaaggaccaatcatcagtgtgtctgcatcagataatgatcttaggctccgagtgc aagcatatgatagcttctaccctgacaatattgccaatgctagcgtgagagttaacgtgactcgtaatcctgcaggtcca ctgttcagtaaaaacgtgtatgaaacgaccatcaatgagtaccatccgttcggtgtgtctatagactcattgtccgcagc agatgctgatggggatgtaattgccttctccatcataacaccaaatattgccgatgactatttctacgtcaatccaagaa ctggtgatattttcttgcggcgttcaccaagtgaaaatccaagtgtgaatcgatacaatttcacagtccaagctagtgat cagaggaatcctcctcaaattagaacggctacggtaataatcaacatccgaccaaaccaacgtcccatcaccaacctacc tctgactttaagtatatcagagagcacgcccgtcaaccagaacataatccaagtaatagggaatgatccagatatgttgg ataccgttacatattttgcctctggtactccggcagctttagagtatttctacttgaacccatccacgggagaaattgtc ctcatcaaagacctgtccactacttctgataaaacatttacgatgaatatagttggtaccgatggaatgaatcccgaaaa acaaggatttgccactgtgaccattaacgtacaacgtgacgaagcattgccgatcttcggccgaacatattccgcaagca tagtagagacaaatccagttggtactagcattgaacgagtgcaagccacagatactgatttgaggggatccattgagtat gaagtgattggagtgtatccagctccaagtttctttgatgtggacagaacttcaggtgttgtcagcatcatacaagatct caaaaatgacagatctgccagaacaaattatgtggaccagttgacctacagtttgaccggcgatgcatcatgcattcaga acttctacattatacagagtacaggagaggtcatactaaaccaaaatctccttaactccaatgatgtcgtattcaattgc atagtttctgtatctgacaatggttacccacaaccaaagacggacactgccaacttgcaaatcaccgttactcgtggtgt cagtccggtgttctcccaacagaattatagggcaagtgtacaggaagacatcccagttggtgccaatgtcggcgtaccag tgtctgcaaacaggcaaccagcaccaatttctcctgaccgcatcttctatgagattatcggaaactatcccgcccagagc ttctttaccattaataatgcaacaggacagatatcagtctctcaagatctgcgacaagatggcctgaagttatctcagta cactgtgagagttgctgcatatggtacagataaacccaatttgaggtctgtagtcgactacgtaattgacgtgaccagaa acctaaacggaccacgcttccaacctccctctgagaccatcactctccctgaagccaccgatatctcattctggtccatg gtccagaacgtaacggatccagatggagataagattacgtacaccagccgaggaaacgctgtggacaaccaattcttcta tgtcaacccagagagtggtgctatagttttagttggcgacctgacccaggatactcaaacttctcatgtgttatatgttc ttggtattgataatgctccagttccaagaaccgctactgcaacgatcgtagtgagtgttaaccgtaataatgcaccacgg ttcaataacccagctggcctcgttacgtcagtctcagaagcagttggagttttggatactattatcacagcccaagcctc agatccagatgatatcaccaacttgaatggtcagatagaattctacttcgttggaccagcagaggctgctagagtattcg gaataaatgagacatccggagccatttacccaagaattagcctcaaagatgctacccaagatttatgggtattccagatt ggagtacgggacaagggtaatccagctctctcagctactgctactgtcagaataacggtacaaagaatcgacaagccacg cttcaccgattccgaatatgacgtcacaatacaggaatctaaaccagtcggagagagcgttattcctttacaagtcatca acaatcaaccaggaagcacgattgtatatgagatcagaggagatgggttagctggagaatactttaacatcacacaagcc ggtgtaatatctgtcaataaatcactcgtcctagatggaaatagaactcctatgtatactgtgcgagtgtttgcttaccg acaaggagaaccattggaatatgccgaggctttagtaagaatcaccgttatcaggaatccatcatcgcccacattcgctc acggcaaccttgtcgtcaggattaacgaggatactccactgtcaacgtctatcatacgagttaacgctacggatccagac cctggtgacaatggaaaaatcacctacttcttcagtaaccaggaatctcagcctgtgtacgccacagactacttcttcgt taatcctaccaacggtattatacaagtcacaggcaatatcaggggcgaccctaatacaccccaatatgagttggtagttg ttgctagggacggtggaatacccagtcagcagagccaaatccgagttactgttattatcgagagaaatccgaatgcacca aacttcatacagagaaattatgaagttacgattccagaaagcttgccaccagattcatctgtactggatattgccgcagt tgatccagatggcgatgccattacatacagaattgtaccagatccacctgcttctctatacttcaagatcaataatatcg gtaattctggacgaatagccaccgtaacagatctgtatcaagaccagtctgatcgttatgtgatcattgttgaagcaact gacaacacaaattcaccactcaccggtacagctactgtgaccataaatgtcaacagaaatatcaacccgccggtcttccc aacgaactttgccagcgtcatcatatcggaatacgagcctctgcagcagatcatctaccgtgccgtagctacggacgctg atccaagctccagctctagcggtatcctccgataccagatcaattccacaaatccttccgatgcttcgctatacttcaca atcagttcaacaactggcgatatctatgttgcacagactctcgcagccaataattcactggccagtaataatgctcaaga tcaagcattgttatccatcgtggctaaagatatatcaaacagtcctaaggcagccctaatgaccctcaatataaccatcg tacgtaaccagagggcaccagtgtttacgatgtctccatacaatggtagtgctacggacacgtcgcccctcggatttatt gtcgtaaatgtatcggccagagatcctgatgtggataacgtttataacaacggaacaccaaatgcccaagttgtgtacag tattaagcctggagttgatgccagatattttgacgtcagccaaggcggaaatgttgtcgtagctcaacccctacccacca aaaatactactacagaactagtgtttgatgtcttggcatgtgacaacggctggaataagaaatgcagtgaagccagagtt aacatgtcgctatctcaccaagtcatacaagccggaaatcttggattcaaacaaccaatttactatcttgacttgaggga aaaccaaccaatcggagatttgatggaaatggacgttgaaaatcaaggagaatcacgtatcgaatgcgaaattataagcc agaaagaaaatccaccactcttcagtgtcgaatgggatcaattcagcaaaaactgcaaactgacattattgaaaggactg gattatgagacccaaacttcatacaatgttacagtgcaagtgtcaaagagcatctctcaaactagaagaaaacgacagat ttacgtgtacaatacctttaatccagctgttgtgatagttaaagtattagatgtaaatgaacacagtccggtattccagt atccactttatcccagacaagcgtcagatacaaagaattactatttcggagcaatttcatcacaagccagacctgacaga tctgttctggaaatttttattaacctgatctacccacataacagatttgttcttgttctggacggtacaaatactgaaga ggtggctgcaagacaggaagcaataagacaagccatacaaacagcctcaggaaaagttgctcttatagaaagtattgaac gtcgacgaaatctgcaagattctaacagcttggttattgacaacacaggcactgatgtatactttgtgctacaagagcca tttggaacattcccactcatcaacaactcacgacaaacagaattattcccagaggctagagttaccgatttgattggaat actaagaagtaatgcaaatctatcagcagaagttatacgcacgccatacgaaggagcatcgatcgtttcccttcgtctcg gtaaatcatacgtatggtggttagacgacccatgggcagctctgattgctttagctgcaatctcaattcttctctgtctc gttggaattatagttctaacatttactcattctagatatataaagtatgtagaagcatatagagtccatgtacaaaatta tgatcaaccagaattcctcgaaccacctagtttcctacgggaatatgaaactcagaaaaattttgtctctatttgttaca ctttgcttgattttgttcaaaaatactgtattgttgtgtatcgttttnagctggggaagaagttacatctgcagtaa |
|
Protein
| Protein ID | pfu_aug1.0_5714.1_23879.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5714.1_23879.t1 FTVIAQDIGRRTGSASVIIDVVRDADPVFRNTPYNTQISERSPVGQSIYTITATDSDLKLRVQAYDPQYPTDRAEETVTI TITRNENPPVYNQLSYNANISETTAIGVSVLRVNATDRDGDRVTYTRVGTSVADTYFVLDGSSGIISVRADLTQDQGTTY TMVIRASDNGNPVKTTDISVFISVFRDTSRPVFGIPNYQRTVNENVPIGTSLITVQATDADLVGQIRYDKDGIYPAPSLF NIDPILGNISVARNLRSDTIRTTSVYNLRVIAYDTFRPDARGTATVQITVLRNPSTPQWSLPTFSTTIREDHPVLSGVIN VTATDADPTDQITYAILNEVEERTLTNNHTFYINADTGLISLGKSILGTQVQRFILTVQACDNGVPQRCANTTVTISIDQ NKNAPAFANTPYTRTINEVTPVTSQVLVITANDASLRGALQFEILPPGTDYFTLDAFSGNLTLAKDLRTSLESSYSFKVV TYDSGEPQYRATADVTVIIIRNLNGPVFLTDPYVVAALDQNTNFGSTVINTTATDLDGLKIASKVVMSGLGVSKLQVYRN MKKDTLRYFIGGNATVKAYFDVNPDNGVIFLRQLLSSPPVGFFSFPVYARDQRVVNEKTGTATVQITIDFDENPRFLDPS YNQQLLESHAVNSFVIQTRAEDPDLKGTLVYESIGLFPAEAFFAVNRTNGVVTLTRDLREDSANLQSYTLRVVAYDSVIP NNRATTDVVITVIRNPAAPVFQPNADYSTVITENATLGSSVIDINAVDQDGDTVTYELVASSPADGGDFFFLNRDDGMIT VKRPLTETSNSFYQLTIQARDGRGQAANATARITITRLPANQPPFYVNRPYNVTIRFDHGIGSSVLQILAQDSDLQGAIV YEILGIYPGPDFFGINSTNGLITLKQSLNNDVLQTLQYTLRLSVYDSAQPAQKVETNAIINVIRNPTSPIYVQPTGYSVT INEKFSVGGLVLRVNATDSDGDTVLYNMLMDTQGLTASEFFFVNGADGGIYVIKDLTTTNTNAFSFQIRARDQGIPERYA FVSVLINIERDNFDPGFGLSNYFVQVLETEPVNNPQGPIISVSASDNDLRLRVQAYDSFYPDNIANASVRVNVTRNPAGP LFSKNVYETTINEYHPFGVSIDSLSAADADGDVIAFSIITPNIADDYFYVNPRTGDIFLRRSPSENPSVNRYNFTVQASD QRNPPQIRTATVIINIRPNQRPITNLPLTLSISESTPVNQNIIQVIGNDPDMLDTVTYFASGTPAALEYFYLNPSTGEIV LIKDLSTTSDKTFTMNIVGTDGMNPEKQGFATVTINVQRDEALPIFGRTYSASIVETNPVGTSIERVQATDTDLRGSIEY EVIGVYPAPSFFDVDRTSGVVSIIQDLKNDRSARTNYVDQLTYSLTGDASCIQNFYIIQSTGEVILNQNLLNSNDVVFNC IVSVSDNGYPQPKTDTANLQITVTRGVSPVFSQQNYRASVQEDIPVGANVGVPVSANRQPAPISPDRIFYEIIGNYPAQS FFTINNATGQISVSQDLRQDGLKLSQYTVRVAAYGTDKPNLRSVVDYVIDVTRNLNGPRFQPPSETITLPEATDISFWSM VQNVTDPDGDKITYTSRGNAVDNQFFYVNPESGAIVLVGDLTQDTQTSHVLYVLGIDNAPVPRTATATIVVSVNRNNAPR FNNPAGLVTSVSEAVGVLDTIITAQASDPDDITNLNGQIEFYFVGPAEAARVFGINETSGAIYPRISLKDATQDLWVFQI GVRDKGNPALSATATVRITVQRIDKPRFTDSEYDVTIQESKPVGESVIPLQVINNQPGSTIVYEIRGDGLAGEYFNITQA GVISVNKSLVLDGNRTPMYTVRVFAYRQGEPLEYAEALVRITVIRNPSSPTFAHGNLVVRINEDTPLSTSIIRVNATDPD PGDNGKITYFFSNQESQPVYATDYFFVNPTNGIIQVTGNIRGDPNTPQYELVVVARDGGIPSQQSQIRVTVIIERNPNAP NFIQRNYEVTIPESLPPDSSVLDIAAVDPDGDAITYRIVPDPPASLYFKINNIGNSGRIATVTDLYQDQSDRYVIIVEAT DNTNSPLTGTATVTINVNRNINPPVFPTNFASVIISEYEPLQQIIYRAVATDADPSSSSSGILRYQINSTNPSDASLYFT ISSTTGDIYVAQTLAANNSLASNNAQDQALLSIVAKDISNSPKAALMTLNITIVRNQRAPVFTMSPYNGSATDTSPLGFI VVNVSARDPDVDNVYNNGTPNAQVVYSIKPGVDARYFDVSQGGNVVVAQPLPTKNTTTELVFDVLACDNGWNKKCSEARV NMSLSHQVIQAGNLGFKQPIYYLDLRENQPIGDLMEMDVENQGESRIECEIISQKENPPLFSVEWDQFSKNCKLTLLKGL DYETQTSYNVTVQVSKSISQTRRKRQIYVYNTFNPAVVIVKVLDVNEHSPVFQYPLYPRQASDTKNYYFGAISSQARPDR SVLEIFINLIYPHNRFVLVLDGTNTEEVAARQEAIRQAIQTASGKVALIESIERRRNLQDSNSLVIDNTGTDVYFVLQEP FGTFPLINNSRQTELFPEARVTDLIGILRSNANLSAEVIRTPYEGASIVSLRLGKSYVWWLDDPWAALIALAAISILLCL VGIIVLTFTHSRYIKYVEAYRVHVQNYDQPEFLEPPSFLREYETQKNFVSICYTLLDFVQKYCIVVYRFXLGKKLHLQ |
|