Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5715.1_16738
Locus scaffold5715.1 : 1 ... 19769 : +
To GenomeBrowser scaffold5715.1:1..19769
Genes list of scaffold scaffold5715.1
Synonym pfu_aug2.0_11113.1_13095

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_5715.1_16738.t1 1 1 GST_C_3 72 184 2.7e-12 47.0 1.7e-15 4.2e-12 46.3
pfu_aug1.0_5715.1_16738.t1 1 1 GST_C_2 113 181 1.3e-07 31.4 9.1e-11 2.2e-07 30.6

Transcript
Transcript IDpfu_aug1.0_5715.1_16738.t1
Definition-
>pfu_aug1.0_5715.1_16738.t1
aatgttcatagccttaaaacaagctccaaagggaaatggccatggatagaattcaacggtcaagcattagctgattcagg
atttattatcaaatttctgaataaacactttaatgtcaacctgaacgccaatttaagtgaagaagaaaaggcagcggctc
atgcaatacggagaatggtggaggagaatacttactggagtggcttcctcacccgatgggtgtatgacaaagatcttctt
gcaataccttactacggcattcctaaaccaataggctgggtcatcagtaaatcaatgaagaaaagagctgtagctcacgg
aatagggcgacatacgaaagaagaggtgtacgaaataatgagggaggactataccgctctttctaaatttttaggaaata
aacagtttctgctaggggatagaccatgtgaagaagattgtgccatatttggatatctcggccaagcttattggcatggc
tttggtcaagaaccagaaacagcacttaaagagttcccgaacctgtgttcatattgtgagaggatgaaaaatacgttttg
gccagattgggaggagtgtaatacagatggaggaaaaaggacagctactaaataa

Protein
Protein IDpfu_aug1.0_5715.1_16738.t1
Definition-
>pfu_aug1.0_5715.1_16738.t1
NVHSLKTSSKGKWPWIEFNGQALADSGFIIKFLNKHFNVNLNANLSEEEKAAAHAIRRMVEENTYWSGFLTRWVYDKDLL
AIPYYGIPKPIGWVISKSMKKRAVAHGIGRHTKEEVYEIMREDYTALSKFLGNKQFLLGDRPCEEDCAIFGYLGQAYWHG
FGQEPETALKEFPNLCSYCERMKNTFWPDWEECNTDGGKRTATK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495