Gene
| Gene Model ID | pfu_aug1.0_5716.1_23880 |
|---|---|
| Locus | scaffold5716.1 : 1 ... 22365 : - |
| To GenomeBrowser | scaffold5716.1:1..22365 |
| Genes list of scaffold | scaffold5716.1 |
| Synonym | pfu_aug2.0_1190.1_01462 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5716.1_23880.t1 | 8 | 1 | TPR_MLP1_2 | 18 | 91 | 3.9e-30 | 104.2 | 0.072 | 530.0 | 0.3 |
| pfu_aug1.0_5716.1_23880.t1 | 8 | 2 | TPR_MLP1_2 | 56 | 176 | 3.9e-30 | 104.2 | 0.0076 | 57.0 | 3.4 |
| pfu_aug1.0_5716.1_23880.t1 | 8 | 3 | TPR_MLP1_2 | 217 | 291 | 3.9e-30 | 104.2 | 4.8e-05 | 0.36 | 10.5 |
| pfu_aug1.0_5716.1_23880.t1 | 8 | 4 | TPR_MLP1_2 | 335 | 352 | 3.9e-30 | 104.2 | 0.0034 | 25.0 | 4.5 |
| pfu_aug1.0_5716.1_23880.t1 | 8 | 5 | TPR_MLP1_2 | 354 | 476 | 3.9e-30 | 104.2 | 1.6e-07 | 0.0012 | 18.6 |
| pfu_aug1.0_5716.1_23880.t1 | 8 | 6 | TPR_MLP1_2 | 493 | 613 | 3.9e-30 | 104.2 | 0.00014 | 1.0 | 9.1 |
| pfu_aug1.0_5716.1_23880.t1 | 8 | 7 | TPR_MLP1_2 | 646 | 757 | 3.9e-30 | 104.2 | 0.008 | 59.0 | 3.4 |
| pfu_aug1.0_5716.1_23880.t1 | 8 | 8 | TPR_MLP1_2 | 748 | 876 | 3.9e-30 | 104.2 | 7.8e-32 | 5.8e-28 | 97.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5716.1_23880.t1 | gi|158508582|ref|NP_001100655.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_5716.1_23880.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5716.1_23880.t1 atggccttgaccttggatgaatggaagcgacttacagagcaagtgtctaaatctgagaatgccaaagtggaagcacaggt taaactgtcggaagtacagagccagtttgtatctgtggagtcgtcaaaacttttggacatccaaagccagttacagctga aaacagaggaagtgtcgcaccttcagaatacggtagaaacacttaccaatacaaacaaggaacaagcaaagaagatcgag aactacatcaaaaagctggaagatgctaaatacatgcagattcagtctgaggagcagtatagacaggaactggatggtag gaaaagattaggagagctttataagacctcggccacggaggcagagaacaaagtagatgaactgacacgagctgttgagg aactaaggaagctattaaaggatgcatctacagcttacacagatttggaagaggaaaagaaaactgctgaagagcagcta aaaatagaaataagtcagaaagaaacagcaatacagaaactgaaccaagagttggtgaatgctaatgacctaatccagga agctaggagcagaggtgcctcagcagaacaagtagaatctcttttccctacagctgctgctacaagcaaattactgaaat ctggaatgactctaactcaggaaattgaagagaaggcaccaatactaaggaaacaaaaagaagattatgagaatgcagta catagtgtggaacagctgtcaaaacagctagatgctgcaatgctcgactgtcagaactaccgtacagaagcagatcagac aacaagaaagtacaatatgatgcagagagaaaatcatcgactacaacaacagacagtggatctttctaaacaggttcagt acttggtaaaggaaatagaacaggtgagaggaggtagagtgatcaataagagggagatttcctccagtgatgtcactagc tcctcccatgttatcacagaagatcttgtcacttttgggagtatagaggaacttcatgaacagaataaagctcttctaca aacaatacggcaactaaacgaaaagaagaaagaagacgagaccttagccacagaatcacgaacaaaggaactgaaggacc agttagacagatcacttaaggaggtacaggagcttagatctgccagagaaagacaggctgacctggtaattgaaacccta cacacaccgaagaggcagtcacttggtaatgtatccatagagagtcctgggatggaacagtcagtagaggagaaagctaa agctctacaacaactacaggaagactttgacagctataaaacagagatgaaggaaaatcaaaaaatgttgaatgatcaaa taggcaagctccagaaccaagtatctgacatgagggtccaaaacatgcagctatcttctcagctggacttttccggagag aggtacaaagttctacagagcaatgctgataattacaggaaggagataggagcactgagagagaaggagaagaaattgtc cacttctatagccaaacatgagcaaactataaacacactcagacaagacttacttaaggtacaggagaatgcagctcgtg ctgaggctcagtgccagaatctgaaagtagaaaaggaattgatgagatcagcagaacaaaggatgatatgtgaattggag aatgcacgtaaaactcaggcttctcagagtatggtgatggctaatctacagtcaatacagaacagcttagagagatctga gtttgacactaagacacggtacactaaccagatagagaagttagagatggagatcaaatcattacaacgtaaaattgaga aagaagaaggggagagggaggcccttaaaacatgctatgagacaattttcnaatcggacccacttgtcagatcagattcc agtatgaatgttgacaaagaagaagtaaagaaccttaaaactgagctagaagattccagacgggaagtccacaatttgac agagcagctgactcagtgtagacaacataaacaggaatatatggagctagccaacaacttacagggggcaatagataacg aggcggaaatgacaaagaacgcacaggccagactacaggccgcggaggaagaccaagactcgatgagatcaagtatgcag atactggagaaacataaacaacaaatacaggaggaaaataagaaagaaagcgaggaaaatcacaaaatgattgctgacct gagaagagaacgatctaagattcaaggagaattacaggaggcaatacagaatctgtccgaggccaactcacaggcgtcgg cagcacgtgaagattgcagtcggcagtctcagctagcagcagaggcacaggataaataccagagagagcttatgcttcac gccgcagatgtagaggctttgacaacagtcaagaaacagttagaagagtttaatactaaattttcaatggaacaagagac acgacagaaggcagaaagttctctgtcagagtgcaaggaatcttgggaagagcaggaaaagatttataaacaggagatag agaaactggaaattagatgtcaggatctcaataaacagaacaatatagtccacgatcaaatggaaaag |
|
Protein
| Protein ID | pfu_aug1.0_5716.1_23880.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5716.1_23880.t1 MALTLDEWKRLTEQVSKSENAKVEAQVKLSEVQSQFVSVESSKLLDIQSQLQLKTEEVSHLQNTVETLTNTNKEQAKKIE NYIKKLEDAKYMQIQSEEQYRQELDGRKRLGELYKTSATEAENKVDELTRAVEELRKLLKDASTAYTDLEEEKKTAEEQL KIEISQKETAIQKLNQELVNANDLIQEARSRGASAEQVESLFPTAAATSKLLKSGMTLTQEIEEKAPILRKQKEDYENAV HSVEQLSKQLDAAMLDCQNYRTEADQTTRKYNMMQRENHRLQQQTVDLSKQVQYLVKEIEQVRGGRVINKREISSSDVTS SSHVITEDLVTFGSIEELHEQNKALLQTIRQLNEKKKEDETLATESRTKELKDQLDRSLKEVQELRSARERQADLVIETL HTPKRQSLGNVSIESPGMEQSVEEKAKALQQLQEDFDSYKTEMKENQKMLNDQIGKLQNQVSDMRVQNMQLSSQLDFSGE RYKVLQSNADNYRKEIGALREKEKKLSTSIAKHEQTINTLRQDLLKVQENAARAEAQCQNLKVEKELMRSAEQRMICELE NARKTQASQSMVMANLQSIQNSLERSEFDTKTRYTNQIEKLEMEIKSLQRKIEKEEGEREALKTCYETIFXSDPLVRSDS SMNVDKEEVKNLKTELEDSRREVHNLTEQLTQCRQHKQEYMELANNLQGAIDNEAEMTKNAQARLQAAEEDQDSMRSSMQ ILEKHKQQIQEENKKESEENHKMIADLRRERSKIQGELQEAIQNLSEANSQASAAREDCSRQSQLAAEAQDKYQRELMLH AADVEALTTVKKQLEEFNTKFSMEQETRQKAESSLSECKESWEEQEKIYKQEIEKLEIRCQDLNKQNNIVHDQMEK |
|