Gene
| Gene Model ID | pfu_aug1.0_57177.1_12877 |
|---|---|
| Locus | scaffold57177.1 : 476 ... 4061 : + |
| To GenomeBrowser | scaffold57177.1:476..4061 |
| Genes list of scaffold | scaffold57177.1 |
| Synonym | pfu_aug2.0_604.1_14367 |
Manual annotation
| Study field | Environmental Response |
|---|---|
| Gene name | class A rhodopsin-like G-protein coupled receptor GPRnna13-like |
| Description | XP_002426691.1 class A rhodopsin-like G-protein coupled receptor GPRnna13, putative [Pediculus humanus corporis] >gb|EEB13953.1| class A rhodopsin-like G-protein coupled receptor GPRnna13, putative [Pediculus humanus corporis] 122 122 91% 9e-29 30%1 1 7TM_GPCR_Srw 34 324 2.3e-19 69.5 4.1e-23 2.8e-19 69.21 1 7tm_1 55 307 1.7e-21 76.4 3.3e-25 2.3e-21 76.0C-terminal truncated? |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_57177.1_12877.t1 | 1 | 1 | 7TM_GPCR_Srw | 34 | 324 | 2.9e-19 | 69.3 | 4.9e-23 | 3.7e-19 | 69.0 |
| pfu_aug1.0_57177.1_12877.t1 | 1 | 1 | 7tm_1 | 55 | 307 | 2.0e-21 | 76.3 | 3.5e-25 | 2.6e-21 | 75.9 |
Transcript
| Transcript ID | pfu_aug1.0_57177.1_12877.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_57177.1_12877.t1 atggatccctgccactccccgaaatggaacgattcgtctggcgtgcataataccagcgacactgacgtatactatgtgat acagtatgttggaataccagttttctgtgttttcggaatttttggaaatcttcttaatatcattattctcacaaagatga agtcttgtctgcagaagaaaggagaaaaaggaatgaatacgttccttatcgcgctgggaacgaccgacctcttcttttgt gtgtttgccctttcctttcctttcctgttcaatttccattatgataataagggatttaagtattactatggactgtatgc cactgcagttatcaacatattcattcttgccagcacatggttgactgttgcaatggcaacggaacgctacttagcaatac ggcatccgcttaaacgcatttccaaaatcttagagacgaggacgtggaaaataatattttccgtttatattttctcaagc attttcaatataccaatgttctggagatacaagtcagtggaagttacaagtgaatgcaccaacgaaaccttgttcaatct ggtcatagtcaactttgccgataactttgctcttgacacaacgtaccggttcctgtgggcgatcttcggaaattttgtac catttcttttgctgttgttctttaatatttcaatgtgtagaaaaattcaccagtcgtatttaaaccgtaagaatctgcaa gcattacagtgtaatcgtcagggtccagggaattcaactaatatcatgttggtagccattatcatgatgtttcttctgtt agtggcgccatctgagacaattctatttatagccaagcagacgagttgttctgacaaacattcgatatgtaatatcgaaa ctttctcgaatctcattcaaacaattaatttctctgtgaactttttactttattgtgcgttcagttttaagttcagacga actttgaagcag |
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Protein
| Protein ID | pfu_aug1.0_57177.1_12877.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_57177.1_12877.t1 MDPCHSPKWNDSSGVHNTSDTDVYYVIQYVGIPVFCVFGIFGNLLNIIILTKMKSCLQKKGEKGMNTFLIALGTTDLFFC VFALSFPFLFNFHYDNKGFKYYYGLYATAVINIFILASTWLTVAMATERYLAIRHPLKRISKILETRTWKIIFSVYIFSS IFNIPMFWRYKSVEVTSECTNETLFNLVIVNFADNFALDTTYRFLWAIFGNFVPFLLLLFFNISMCRKIHQSYLNRKNLQ ALQCNRQGPGNSTNIMLVAIIMMFLLLVAPSETILFIAKQTSCSDKHSICNIETFSNLIQTINFSVNFLLYCAFSFKFRR TLKQ |
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