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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_57193.1_12880
Locus scaffold57193.1 : 1 ... 4061 : -
To GenomeBrowser scaffold57193.1:1..4061
Genes list of scaffold scaffold57193.1
Synonym pfu_aug2.0_3804.1_15862

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_57193.1_12880.t1 1 1 Transket_pyr 21 78 5.6e-10 38.9 9.4e-14 7.0e-10 38.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_57193.1_12880.t1 gi|307195718|gb|EFN77558.1| 3.0e-25

Transcript
Transcript IDpfu_aug1.0_57193.1_12880.t1
Definition-
>pfu_aug1.0_57193.1_12880.t1
ggtcaatcatgcagtacattgtcaaggtttctaagcacctcttctgtcagagctgcaactcagatgacagtaagagatgc
cttgaactcggctatggatgaagagattcaaagagatgaaagagtgttcttactaggtgaagaagtagctttatatgatg
gagcttacaaggtttccagaggtctgcatgccaagcatggggacaaacgagtgatagacacaccaattacagag

Protein
Protein IDpfu_aug1.0_57193.1_12880.t1
Definition-
>pfu_aug1.0_57193.1_12880.t1
GQSCSTLSRFLSTSSVRAATQMTVRDALNSAMDEEIQRDERVFLLGEEVALYDGAYKVSRGLHAKHGDKRVIDTPITE

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