Gene
| Gene Model ID | pfu_aug1.0_5728.1_52593 |
|---|---|
| Locus | scaffold5728.1 : 560 ... 8155 : - |
| To GenomeBrowser | scaffold5728.1:560..8155 |
| Genes list of scaffold | scaffold5728.1 |
| Synonym | pfu_aug2.0_332.1_07373 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5728.1_52593.t1 | 2 | 1 | RVT_1 | 206 | 244 | 8.4e-21 | 74.3 | 0.77 | 3800.0 | -3.0 |
| pfu_aug1.0_5728.1_52593.t1 | 2 | 2 | RVT_1 | 295 | 452 | 8.4e-21 | 74.3 | 3.5e-24 | 1.7e-20 | 73.2 |
Transcript
| Transcript ID | pfu_aug1.0_5728.1_52593.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5728.1_52593.t1 atggctgaaaaagttagattacaaattggtaacttcagtcagacacatgacattgtagtgtgtgatatatctgatgacct attacttggcctagattttttgcaagatcatgacacagttattgaccttaaatcctacatggtttcatttggtgaagaaa agataccaataaaacaaataaatgacacaaaatccaccaaacatgtcaacatatacaagatttcaatacagaaacgaacc gtcataccaccaaacactatgaagtttataaaactaaaaacggacatcccttgtcacgaacccttagcaattcaacctcg gaacatacaccaggaattgttttgcccaaattcagtggtatctccaataaacccctatgtggccattagaaatttgtcga gtagatacctcacgttaaagaaaaatgttgacataggggtaggaattggggttgatgagatcataaattttgaagatgat caagaaattgacgaaagaaaagatactgtgtttaacatcaacaaactaggtcaagaagacaaaacagagtctacaaagaa atctaacatgaatgttctaccggattatttaacagatctttatgaaagggcaacatcaaaattaacaaaagaagaaagtc atgaagttcaaaacttgttatcaaaattccaacatgtatttgctgcaaatgattttgatattgggcaattcaatgggaac ataaaacacaagattgacaccaaagatgcacaaccaatcaaacaaaagttaaggcgaacacccatgggatttgaagatga ggaagaaaaacatatacagcaaatgctcgaaaggggaataatccaaccttcctcgtcagaatgggcctctcccccagtgc tcataagaaaaaaagatggtagcctcaggttttgcattgattttagagcactaaacaaagtgacaactaaagacgcattt cctattcccaatttaaaagattgtattgacacactacgtggtaacatctatttcagttcactagacatggcttggggtta ttggcaaatcccaatggatgaaaaagacagacacaaaacagcatttgtcactaagtatggcttatttgagcatgttaggt tgccatttggtttgtgcaatagccctgctacattcagtcgtgtcattcagcttgtactacagggattgacatggcgtgag tgtcttgcttacttagatgatgtgatcgtgataggtgcagattttcagtcccatgtacaaaatctacagaccgtcatgtc tcggtttgaaaagtacaatctgaagcttaaaccaaaaaaatgcaatctattccaaacagaaattaaatttcttggaaaaa tagtgagtgcaaaaggtatttctgtcaaccctgaatgcatagagtctgtaaaaaactggcctcaaccaaaaacgaaaaag gaagttgaatcttttttggggtttgcaaattaccacagagaccatatcaaagaatttgcaaaattagcagagccattaca tgaatcagttaaaaagtcaaaaagatctgaattgtactggttagaaaatcaacaaaatgcatttcaaaaactgaaaattg ctattatcaatgccatttcattagactaccctagtcccaaccctgatgacatctttatcttagatactgatgcatctgac aagtgcgttggtgcagagttgacacaaatacaaaatggctcggagagaattatcagctttgcgaataacattttatacta caaatgggaggacccagtaacacctagatacttatttgttgtaccagattgcatgaaaaaagacattttcaaagcatgcc atgattcaatctcagctggtcatttgggtcagaataaaacattagagagaataaaacaatgtgctatatgggaggataat gacccagtcagtccggcaacctcagatcccctatcacacccacagtcttcagttgagtcggatcatctgattccaactga ttcacagactgtgtccgactatcgtagtggtaggaaaacgcggagaccacggtatctggatgattatgtggcctaa |
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Protein
| Protein ID | pfu_aug1.0_5728.1_52593.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5728.1_52593.t1 MAEKVRLQIGNFSQTHDIVVCDISDDLLLGLDFLQDHDTVIDLKSYMVSFGEEKIPIKQINDTKSTKHVNIYKISIQKRT VIPPNTMKFIKLKTDIPCHEPLAIQPRNIHQELFCPNSVVSPINPYVAIRNLSSRYLTLKKNVDIGVGIGVDEIINFEDD QEIDERKDTVFNINKLGQEDKTESTKKSNMNVLPDYLTDLYERATSKLTKEESHEVQNLLSKFQHVFAANDFDIGQFNGN IKHKIDTKDAQPIKQKLRRTPMGFEDEEEKHIQQMLERGIIQPSSSEWASPPVLIRKKDGSLRFCIDFRALNKVTTKDAF PIPNLKDCIDTLRGNIYFSSLDMAWGYWQIPMDEKDRHKTAFVTKYGLFEHVRLPFGLCNSPATFSRVIQLVLQGLTWRE CLAYLDDVIVIGADFQSHVQNLQTVMSRFEKYNLKLKPKKCNLFQTEIKFLGKIVSAKGISVNPECIESVKNWPQPKTKK EVESFLGFANYHRDHIKEFAKLAEPLHESVKKSKRSELYWLENQQNAFQKLKIAIINAISLDYPSPNPDDIFILDTDASD KCVGAELTQIQNGSERIISFANNILYYKWEDPVTPRYLFVVPDCMKKDIFKACHDSISAGHLGQNKTLERIKQCAIWEDN DPVSPATSDPLSHPQSSVESDHLIPTDSQTVSDYRSGRKTRRPRYLDDYVA |
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