Gene
| Gene Model ID | pfu_aug1.0_57381.1_41675 |
|---|---|
| Locus | scaffold57381.1 : 1 ... 3335 : - |
| To GenomeBrowser | scaffold57381.1:1..3335 |
| Genes list of scaffold | scaffold57381.1 |
| Synonym | pfu_aug2.0_138.1_26927 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_57381.1_41675.t1 | 2 | 1 | Fasciclin | 12 | 37 | 2.1e-37 | 127.9 | 1.5e-07 | 0.0022 | 18.0 |
| pfu_aug1.0_57381.1_41675.t1 | 2 | 2 | Fasciclin | 51 | 176 | 2.1e-37 | 127.9 | 1.8e-35 | 2.7e-31 | 108.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_57381.1_41675.t1 | gi|325296986|ref|NP_001191507.1| | fasciclin-like protein precursor [Aplysia californica] | 1.0e-39 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_57381.1_41675.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_57381.1_41675.t1 atgtctagacaacaaagatggctacagactgcacagtgtggtcgtataataatgggaaatattccttcctgtaatggttt gattcaccttgtagataaggtgttgatcccacccgttggtaatattcttgatgttctggcccaggatcgcaggtttacac agttagttgaccttctaaagagggcggggctagctgatgcactccagggagagggacctctcactatttttgctccaacc aatcaggcttttggtaagattcccagtagtaccttacagagtctggccagtgatgtggatcaactacaaactgtactcaa acttcatgtcatcaaaggcttcctatgctgtgctggaatctttgaggacaactttttccatcgtaatagaatctcttctc tggaaggaaccagacttcgtattcgtaaagaaggtgatcagcttatggtacaaagctctacaatcagctcatgtgacctt acaggaaccaatggagtggtccatgccatagacagtgtaatattacccaatcaaaagcagcgtgacagatcatggtatgg ttattattacaactga |
|
Protein
| Protein ID | pfu_aug1.0_57381.1_41675.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_57381.1_41675.t1 MSRQQRWLQTAQCGRIIMGNIPSCNGLIHLVDKVLIPPVGNILDVLAQDRRFTQLVDLLKRAGLADALQGEGPLTIFAPT NQAFGKIPSSTLQSLASDVDQLQTVLKLHVIKGFLCCAGIFEDNFFHRNRISSLEGTRLRIRKEGDQLMVQSSTISSCDL TGTNGVVHAIDSVILPNQKQRDRSWYGYYYN |
|