Gene
| Gene Model ID | pfu_aug1.0_5740.1_67316 |
|---|---|
| Locus | scaffold5740.1 : 12246 ... 36558 : + |
| To GenomeBrowser | scaffold5740.1:12246..36558 |
| Genes list of scaffold | scaffold5740.1 |
| Synonym | pfu_aug2.0_138.1_26920 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5740.1_67316.t1 | 1 | 1 | FGGY_N | 6 | 151 | 7.2e-23 | 81.1 | 3.2e-26 | 1.2e-22 | 80.4 |
| pfu_aug1.0_5740.1_67316.t1 | 1 | 1 | FGGY_C | 152 | 215 | 5.7e-15 | 55.4 | 2.5e-18 | 9.1e-15 | 54.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5740.1_67316.t1 | gi|156553151|ref|XP_001601900.1| | PREDICTED: FGGY carbohydrate kinase domain-containing protein [Nasonia vitripennis] | 3.00018e-42 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5740.1_67316.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5740.1_67316.t1 atgcagatggcacattacattggcattgatgtgggtactggcagtgtaagagccgctttagtcacctcaaaaggcaaaat tgttacaactgctacccaggagatagaagtatcgtctccattaccagattattacgaacagtcatcggagaacatatgga agtctgtgacagataccgtcaagataattcttcacacttctggtatcagtaaagacagtatacatgggataggatttgat gctacatgttccctggtggtactagacaaggactgttatcctgtctctggtagtccttcaggtaattctgcatataatgt tgtgatgtggatggaccatagagccaaggaccaagctagtgagataaataataccaagcacaaagccttgaaatcagtgg gagggaaggtctctcctgagatggagcctccaaaactcatgtggctgaaaaagtatgggacaaggcacatcatagaggaa aatgtcagagcaggacattgtgtaaaggtgatttacatgtgtggaggactgaggaagaatccattatttgtacaaacaca tgctgatgtgacaggtatacctattattctgcccgatgagaaggagtcagtgttacttggtgcagctgtactaggagcca ctgcctcaaaggactttacctcaatacaggatgcaatgctgagtatgtgtggtaaaggaaaggtcattatgccaaataca caaaatgcagaattccatcagaagaagtacacagtattcctcaagatgctggaacatcagagagaataccagcaaatcat ggacagctaa |
|
Protein
| Protein ID | pfu_aug1.0_5740.1_67316.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5740.1_67316.t1 MQMAHYIGIDVGTGSVRAALVTSKGKIVTTATQEIEVSSPLPDYYEQSSENIWKSVTDTVKIILHTSGISKDSIHGIGFD ATCSLVVLDKDCYPVSGSPSGNSAYNVVMWMDHRAKDQASEINNTKHKALKSVGGKVSPEMEPPKLMWLKKYGTRHIIEE NVRAGHCVKVIYMCGGLRKNPLFVQTHADVTGIPIILPDEKESVLLGAAVLGATASKDFTSIQDAMLSMCGKGKVIMPNT QNAEFHQKKYTVFLKMLEHQREYQQIMDS |
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