Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5740.1_67317
Locus scaffold5740.1 : 37909 ... 39756 : -
To GenomeBrowser scaffold5740.1:37909..39756
Genes list of scaffold scaffold5740.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_5740.1_67317.t1 gi|291224757|ref|XP_002732368.1| 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
8-16cell 1
egg-Dshape 1
>Adult tissues
Dshape 1
mantle 1
mantlePallium 1
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_5740.1_67317.t1
Definition-
>pfu_aug1.0_5740.1_67317.t1
atgatacagatggagagtgaactggatagattctccaagcagaatacacagctagagctcagcatcaaggagttgacaca
gaaactcaaggctactgataaggaaatgcatttggaaagagaaaaggtgcatgatatcaaggccaaactgaagcagttca
agacagatctacacaattgtgtgggctacatccaggatccaaagatgctgaaggagacgataaaggcactctatgccaaa
cacgtcagagacgacatcggtgagtcagctaatgttgatgcagacatccagaaggagtatagcagacagcgggaacactt
ggagagatcagtagcgtcactcaggaaaaagctgtcaaaggattctgaaatccacagagctgataatgtcaggatcatgc
aggaaaatgtatccctaatcaaagaaatcaacgatcttcgtcgcgagttgaagattgctagaactcaaatccacgatttg
gaggcagcaatgggtctccatagtaagaagaacaaacaggagggagctaccattgctatgtttacaactaaaggacctag
tgctctagtacaaactgatttggaagaaaaagagaaaattatagaaatgcagaaattagaaatgggaaggttacgacaac
aaatgcaggagttggaattaggaatgggttcaagacctccctctggacagaaattacaaccaatcgaatccaccgcatga

Protein
Protein IDpfu_aug1.0_5740.1_67317.t1
Definition-
>pfu_aug1.0_5740.1_67317.t1
MIQMESELDRFSKQNTQLELSIKELTQKLKATDKEMHLEREKVHDIKAKLKQFKTDLHNCVGYIQDPKMLKETIKALYAK
HVRDDIGESANVDADIQKEYSRQREHLERSVASLRKKLSKDSEIHRADNVRIMQENVSLIKEINDLRRELKIARTQIHDL
EAAMGLHSKKNKQEGATIAMFTTKGPSALVQTDLEEKEKIIEMQKLEMGRLRQQMQELELGMGSRPPSGQKLQPIESTA

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495