Gene
| Gene Model ID | pfu_aug1.0_5742.1_67320 |
|---|---|
| Locus | scaffold5742.1 : 6436 ... 13670 : + |
| To GenomeBrowser | scaffold5742.1:6436..13670 |
| Genes list of scaffold | scaffold5742.1 |
| Synonym | pfu_aug2.0_109.1_30225 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5742.1_67320.t1 | 1 | 1 | CBM_21 | 329 | 429 | 1.4e-28 | 99.1 | 5.8e-32 | 2.9e-28 | 98.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5742.1_67320.t1 | gi|291232414|ref|XP_002736153.1| | PREDICTED: glycogen-binding subunit 76A-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 2 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5742.1_67320.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5742.1_67320.t1 atgctggttagctacagcgacgaggaggctgatgatgcaggtttttgtttacctcggaatttatcttatgcagaggagag ttacctgaattcttacagcgtaagtagtgcatttgtgaacacagttaacaaagagaaaagaagtttatatgacactgaag tttatttattaaacagtgcaattatggctgaaaacgaagtcgtgaaatcttgcaatgacccggtgcccctcaaggtgaag ttagtacagacgcactcaaaacgtatcagttcagatgctgaaattccgtcacagaaaactaatggtgataaacttggatt ttacttaaatactacagatgatttggattctgttgggtcatctagcggtaagtctaactgtagtgagttagagttggcgg atacgatcaatagccctgatgaatacgaccttggaaaggaggatggaggtagtgaggcgacctttggggaagccatatcg aacgctttgaaatctatggaattaaacgatcaatacgaggaagaagaagttaaaaatgagtctgttagttttgcctcaaa gaggctatcgtcccctcctcctctacgcattcagattgatagagctgacgatgatagtgactcagacaaaaaagaccctt taaagggctctcaaaaatctttgctagacagtcctttatatgaagacaaagaatttaatttcaataggacagaattaagg aaatcgtcgtcattgaaagcgacaaaaacaccaccaggaactccgagccggaagaaaatggtgcgatttgcggacgctat gggattagatcttgaatctgtgcgacacgtactaaacaccgatgcaccccctaaaattccggcatccgcgactgccgatc ttcaggtggggatagagaaggacagacagggtataggtagtctatatctttgctcgaaatttcaacaaccaggcgctaaa gaaagcttccttgttacagtaatgacacagaaagtgtcactagaaaacgcagtcataacggatctcacgattaccggtac agtaagagtggcgaatgtagggtttcataaagtagtgagggtccgttatactaccaacagatggacatcatttcatgata tcatggcatcttacgtgcagaactcgtgcgacggaccgacagacagattttcgttcagcgtcgtcgcaccgtctgatttc ggaatcgggtcaaggctagaatttgccatctcttattccgttggagacacagtatactgggacaacaatgatggcgagaa ctactaaacgagttag |
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Protein
| Protein ID | pfu_aug1.0_5742.1_67320.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5742.1_67320.t1 MLVSYSDEEADDAGFCLPRNLSYAEESYLNSYSVSSAFVNTVNKEKRSLYDTEVYLLNSAIMAENEVVKSCNDPVPLKVK LVQTHSKRISSDAEIPSQKTNGDKLGFYLNTTDDLDSVGSSSGKSNCSELELADTINSPDEYDLGKEDGGSEATFGEAIS NALKSMELNDQYEEEEVKNESVSFASKRLSSPPPLRIQIDRADDDSDSDKKDPLKGSQKSLLDSPLYEDKEFNFNRTELR KSSSLKATKTPPGTPSRKKMVRFADAMGLDLESVRHVLNTDAPPKIPASATADLQVGIEKDRQGIGSLYLCSKFQQPGAK ESFLVTVMTQKVSLENAVITDLTITGTVRVANVGFHKVVRVRYTTNRWTSFHDIMASYVQNSCDGPTDRFSFSVVAPSDF GIGSRLEFAISYSVGDTVYWDNNDGENYXTS |
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