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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5765.1_45290
Locus scaffold5765.1 : 27686 ... 34265 : -
To GenomeBrowser scaffold5765.1:27686..34265
Genes list of scaffold scaffold5765.1
Synonym pfu_aug2.0_1140.1_01418

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_5765.1_45290.t1 1 1 rve 15 128 4.5e-25 88.0 3.0e-28 8.9e-25 87.1

Transcript
Transcript IDpfu_aug1.0_5765.1_45290.t1
Definition-
>pfu_aug1.0_5765.1_45290.t1
atggcaagacacctcgtgcacaaatgcaaatcacaggagcaggagcaggagcagagagttgctatggacatccttgaacc
gttacctgtcacgcacaaaggaaataagtacattgtagtgattcaggactactttactaaatgggcagaggcagttccct
taccggatatggaggctaaaacagttgcgcaagctttcatagacaatttcgtaacaaaatttggagtgccacgagttttg
cacccggatcaaggacgccagtttgagtcaaggctattcaaacagttatgtgaaatcctgggaacaaataagacacgtac
tagcccctatcatccaaaatctgacggcatggtcgagcgcatgaaccgaaccattgaaaatatgttagctacatatgtcg
acgcaaatcagagaaactgggacgaacatcttcagttagtatgcatggcgtacagagcagcagagcacgagaatgacgac
tactgcgctccatactgtcctgatgtcatacttgaccccgtcagcgctccatacacctatgaagtagacagtaccgcgaa
ctatgaaatgccggtagatcaaagagaggagttccgacatcaaagggaagatgccgcaacacccgtccataatcaaagaa
gacgccgacaaccgaaacgattcgaagactttcaattgtatcacgtgacacagaagaatggaattcaatctgggaaccag
tatcattccaattttgacaatcggatggcacggacgaaatctacagtcagaaaacaggcagccatgcataagtgtccact
atgtatagaaatattccagagtgccgaggaggtgatagataagtgtgatcactgcgagtacacttcggagagagcagtag
acatgaaaaggcattgcgagcgacgccatgctctgcaatctcaaccttatgagcgggaaaggacacagacgcacgctgac
ggttttaccagtcgccgccgtacgcagcctatgcctgtgtacaacccgaaacggagtaagccagtcagtgccgcagacgc
atcacctgagggacgacgcagcgaatgcaacgtcttttaa

Protein
Protein IDpfu_aug1.0_5765.1_45290.t1
Definition-
>pfu_aug1.0_5765.1_45290.t1
MARHLVHKCKSQEQEQEQRVAMDILEPLPVTHKGNKYIVVIQDYFTKWAEAVPLPDMEAKTVAQAFIDNFVTKFGVPRVL
HPDQGRQFESRLFKQLCEILGTNKTRTSPYHPKSDGMVERMNRTIENMLATYVDANQRNWDEHLQLVCMAYRAAEHENDD
YCAPYCPDVILDPVSAPYTYEVDSTANYEMPVDQREEFRHQREDAATPVHNQRRRRQPKRFEDFQLYHVTQKNGIQSGNQ
YHSNFDNRMARTKSTVRKQAAMHKCPLCIEIFQSAEEVIDKCDHCEYTSERAVDMKRHCERRHALQSQPYERERTQTHAD
GFTSRRRTQPMPVYNPKRSKPVSAADASPEGRRSECNVF

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